RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 C1QCP02747 245 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 GPX1P07203 203 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 METTL15P1P0C7V9 234 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 HSD11B1P28845 292 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 BASP1P80723 227 aaKnown RBP2.29□□□□□ -2.04
SMG1-204ENST00000561940 LIN52Q52LA3 116 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 C10orf126Q8N4M7 172 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 GDPD1Q8N9F7 314 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 MORN4Q8NDC4 146 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 C11orf40Q8WZ69 217 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 POP5Q969H6 163 aaKnown RBP2.29□□□□□ -2.04
SMG1-204ENST00000561940 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 CHCHD2Q9Y6H1 151 aaPredicted RBP2.29□□□□□ -2.04
SMG1-204ENST00000561940 KIAA1549Q9HCM3 1950 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 DMBT1Q9UGM3 2413 aaPredicted RBP2.28□□□□□ -2.04
SMG1-204ENST00000561940 UQCRHLA0A096LP55 91 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 F8W036 122 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 TRAPPC2LH3BP13 241 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 NAPSAO96009 420 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 TRGC1P0CF51 173 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 EIF2B2P49770 351 aaKnown RBP2.28□□□□□ -2.04
SMG1-204ENST00000561940 RPS20P60866 119 aaKnown RBP2.28□□□□□ -2.04
SMG1-204ENST00000561940 BTG2P78543 158 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 SLC36A1Q7Z2H8 476 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 SIGMAR1Q99720 223 aa2.28□□□□□ -2.04
SMG1-204ENST00000561940 C11orf68Q9H3H3 251 aaKnown RBP2.28□□□□□ -2.04
SMG1-204ENST00000561940 NINQ8N4C6 2090 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 MEIS3P1A6NDR6 274 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 IGKV1-5P01602 117 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 PIRTP0C851 137 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 DEFA1P59665 94 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 FAM27BQ5VT28 67 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 OR51A2Q8NGJ7 313 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 TMEM106AQ96A25 262 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 MUC4Q99102 2169 aa2.27□□□□□ -2.05
SMG1-204ENST00000561940 LOC285095A0A1B0GVY8 99 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 ORC5O43913 435 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 OR7C1O76099 320 aaPredicted RBP2.26□□□□□ -2.05
SMG1-204ENST00000561940 SERPINE1P05121 402 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 CASP1P29466 404 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 ZNF80P51504 273 aaPredicted RBP2.26□□□□□ -2.05
SMG1-204ENST00000561940 CTAG1AP78358 180 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 KISS1Q15726 138 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 COA5Q86WW8 74 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 H1FXQ92522 213 aaKnown RBP2.26□□□□□ -2.05
SMG1-204ENST00000561940 GINS4Q9BRT9 223 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 SLC39A9Q9NUM3 307 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 IDI2-AS1Q9NZ38 188 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
SMG1-204ENST00000561940 IGKV1D-43A0A0B4J1Z2 117 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 J3QRK9 145 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 C8GP07360 202 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 PPIBP23284 216 aaKnown RBP2.25□□□□□ -2.05
SMG1-204ENST00000561940 ARF6P62330 175 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 SUPT4H1P63272 117 aaKnown RBP2.25□□□□□ -2.05
SMG1-204ENST00000561940 TAF1AQ15573 450 aaPredicted RBP2.25□□□□□ -2.05
SMG1-204ENST00000561940 MOGQ16653 247 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 MIR17HGQ75NE6 70 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 HSPB9Q9BQS6 159 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 SNRNP25Q9BV90 132 aaKnown RBP2.25□□□□□ -2.05
SMG1-204ENST00000561940 CKLFQ9UBR5 152 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
SMG1-204ENST00000561940 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 hCG_1818297A0A087WSY0 165 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 A8MT66 165 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 SDCBPO00560 298 aaPredicted RBP2.24□□□□□ -2.05
SMG1-204ENST00000561940 SERPINA1P01009 418 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 S100A4P26447 101 aaKnown RBP2.24□□□□□ -2.05
SMG1-204ENST00000561940 C12orf74Q32Q52 190 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 TEX36Q5VZQ5 186 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 DCUN1D2Q6PH85 259 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 DPPA3Q6W0C5 159 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 NDUFA11Q86Y39 141 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 PHF13Q86YI8 300 aaPredicted RBP2.24□□□□□ -2.05
SMG1-204ENST00000561940 BPIFA4PQ86YQ2 179 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 LINC00301Q8NCQ3 95 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 OR8B3Q8NGG8 313 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 GNPDA2Q8TDQ7 276 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 NAT14Q8WUY8 206 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 DNAJC9Q8WXX5 260 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 ISOC1Q96CN7 298 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 DGCR14Q96DF8 476 aaKnown RBP2.24□□□□□ -2.05
SMG1-204ENST00000561940 C2orf50Q96LR7 162 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 PHB2Q99623 299 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 PCBD2Q9H0N5 130 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 ARL5AQ9Y689 179 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 HEATR5BQ9P2D3 2071 aa2.24□□□□□ -2.05
SMG1-204ENST00000561940 SACSQ9NZJ4 4579 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 DYNC2H1Q8NCM8 4307 aaKnown RBP2.23□□□□□ -2.05
SMG1-204ENST00000561940 DSCR4P56555 118 aaPredicted RBP2.23□□□□□ -2.05
SMG1-204ENST00000561940 RUNX1Q01196 453 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 AAED1Q7RTV5 226 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 TRAPPC6BQ86SZ2 158 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 DHFR2Q86XF0 187 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 DEFB108BQ8NET1 73 aa2.23□□□□□ -2.05
SMG1-204ENST00000561940 OR52L1Q8NGH7 329 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms