RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLC25A39Q9BZJ4 359 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-206ENST00000561781 DEFB127Q9H1M4 99 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 MRPL35Q9NZE8 188 aaKnown RBP14.63□□□□□ -0.07
RAB40C-206ENST00000561781 E7EUB6 86 aa14.62□□□□□ -0.07
RAB40C-206ENST00000561781 PLNP26678 52 aa14.62□□□□□ -0.07
RAB40C-206ENST00000561781 ZCCHC24Q8N2G6 241 aaKnown RBP14.62□□□□□ -0.07
RAB40C-206ENST00000561781 SUB1P53999 127 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB40C-206ENST00000561781 NDUFA4L2Q9NRX3 87 aa14.62□□□□□ -0.07
RAB40C-206ENST00000561781 SMKR1H3BMG3 65 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 C17orf58Q2M2W7 97 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 TMEM75Q8N9X5 138 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 IGHV3OR15-7A0A075B7D8 119 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 TRAV25A0A0B4J276 109 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 OR11H6Q8NGC7 330 aa14.61□□□□□ -0.07
RAB40C-206ENST00000561781 ADGRG4Q8IZF6 3080 aa14.6□□□□□ -0.07
RAB40C-206ENST00000561781 TIMM8AO60220 97 aaPredicted RBP14.6□□□□□ -0.07
RAB40C-206ENST00000561781 SFTA2Q6UW10 78 aa14.6□□□□□ -0.07
RAB40C-206ENST00000561781 ASCL2Q99929 193 aa14.6□□□□□ -0.07
RAB40C-206ENST00000561781 INS-IGF2F8WCM5 200 aa14.6□□□□□ -0.07
RAB40C-206ENST00000561781 KLRB1Q12918 225 aa14.59□□□□□ -0.07
RAB40C-206ENST00000561781 Q6ZQT7 251 aa14.58□□□□□ -0.07
RAB40C-206ENST00000561781 PROCRQ9UNN8 238 aa14.58□□□□□ -0.07
RAB40C-206ENST00000561781 CGB3P0DN86 165 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 CGB7P0DN87 165 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 WT1-ASQ06250 92 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 RUSC1-AS1Q66K80 236 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 LINC01587Q99440 93 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 NAV3Q8IVL0 2385 aa14.58□□□□□ -0.08
RAB40C-206ENST00000561781 SMIM9A6NGZ8 99 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 SLC25A20O43772 301 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 MYOZ3Q8TDC0 251 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 AAMDCQ9H7C9 122 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 ZNRD1Q9P1U0 126 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 FLNCQ14315 2725 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 CRIP1P50238 77 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 ADIPOQQ15848 244 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 EXOC3-AS1Q8N2X6 119 aa14.57□□□□□ -0.08
RAB40C-206ENST00000561781 LGALS1P09382 135 aaKnown RBP14.56□□□□□ -0.08
RAB40C-206ENST00000561781 C15orf53Q8NAA6 179 aa14.56□□□□□ -0.08
RAB40C-206ENST00000561781 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
RAB40C-206ENST00000561781 ZGRF1Q86YA3 2104 aa14.56□□□□□ -0.08
RAB40C-206ENST00000561781 PRB4P10163 310 aaPredicted RBP14.56□□□□□ -0.08
RAB40C-206ENST00000561781 MRPL23Q16540 153 aaKnown RBP14.55□□□□□ -0.08
RAB40C-206ENST00000561781 C10orf55Q5SWW7 151 aa14.55□□□□□ -0.08
RAB40C-206ENST00000561781 SPRR3Q9UBC9 169 aa14.55□□□□□ -0.08
RAB40C-206ENST00000561781 SRRM5B3KS81 715 aa14.55□□□□□ -0.08
RAB40C-206ENST00000561781 LYZL6O75951 148 aa14.55□□□□□ -0.08
RAB40C-206ENST00000561781 MYO18BQ8IUG5 2567 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 NDUFA3O95167 84 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 NDUFA11Q86Y39 141 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 ODF3Q96PU9 254 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 TMEM14CQ9P0S9 112 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 ARFGEF3Q5TH69 2177 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 TRAV8-4A0A0B4J246 113 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 CD7P09564 240 aa14.54□□□□□ -0.08
RAB40C-206ENST00000561781 SRSF9Q13242 221 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAB40C-206ENST00000561781 ZNF843Q8N446 348 aa14.53□□□□□ -0.08
RAB40C-206ENST00000561781 SIGLEC9Q9Y336 463 aa14.53□□□□□ -0.08
RAB40C-206ENST00000561781 TNFRSF6BO95407 300 aa14.53□□□□□ -0.08
RAB40C-206ENST00000561781 LINC00694P0DN24 101 aa14.53□□□□□ -0.08
RAB40C-206ENST00000561781 C21orf62Q9NYP8 219 aa14.53□□□□□ -0.08
RAB40C-206ENST00000561781 IGHV1-2P23083 117 aa14.52□□□□□ -0.08
RAB40C-206ENST00000561781 Q8N8P6 123 aa14.52□□□□□ -0.08
RAB40C-206ENST00000561781 DUSP14O95147 198 aaKnown RBP14.52□□□□□ -0.09
RAB40C-206ENST00000561781 LRRC75A-AS1Q8N1F1 130 aa14.52□□□□□ -0.09
RAB40C-206ENST00000561781 DSCAML1Q8TD84 2053 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 H7C1H1 209 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 Q8N1Y9 231 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 OR4C13Q8NGP0 309 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 FAM57AQ8TBR7 257 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 POLEQ07864 2286 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 TRGV5A0A0B4J1U4 118 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 C9JAW5 83 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 F8VRH5 84 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 ONECUT1Q9UBC0 465 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 HIGD1AQ9Y241 93 aa14.51□□□□□ -0.09
RAB40C-206ENST00000561781 PRR14LQ5THK1 2151 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 TRAV2A0A0B4J234 112 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 DUX4L9Q6RFH8 374 aaPredicted RBP14.5□□□□□ -0.09
RAB40C-206ENST00000561781 SCGB1D4Q6XE38 83 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 RNF185Q96GF1 192 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 PCNX1Q96RV3 2341 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 TRAV12-1A0A0B4J245 112 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 GLRXP35754 106 aa14.5□□□□□ -0.09
RAB40C-206ENST00000561781 J3KT08 172 aa14.49□□□□□ -0.09
RAB40C-206ENST00000561781 C10orf126Q8N4M7 172 aa14.49□□□□□ -0.09
RAB40C-206ENST00000561781 CHCHD5Q9BSY4 110 aa14.49□□□□□ -0.09
RAB40C-206ENST00000561781 MRPL20Q9BYC9 149 aaKnown RBP14.49□□□□□ -0.09
RAB40C-206ENST00000561781 RPL13AP40429 203 aaKnown RBP14.49□□□□□ -0.09
RAB40C-206ENST00000561781 IGHV3-21A0A0B4J1V1 117 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 TGFAP01135 160 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 HES1Q14469 280 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 GFRALQ6UXV0 394 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 C3orf56Q8N813 242 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 NTN5Q8WTR8 489 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-206ENST00000561781 UBTD1Q9HAC8 227 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 TENM4Q6N022 2769 aa14.48□□□□□ -0.09
RAB40C-206ENST00000561781 ZNF815PA8K554 130 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 FAM201AQ5SY85 155 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms