RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 GGNQ86UU5 652 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 ARL17AQ8IVW1 177 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 FOXC2Q99958 501 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 C21orf62Q9NYP8 219 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 PRO1854Q9UHT4 67 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 MSRB2Q9Y3D2 182 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 TIMM8BQ9Y5J9 83 aaPredicted RBP5.69□□□□□ -1.5
CDH1-203ENST00000561751 ACACAQ13085 2346 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 ZNF462Q96JM2 2506 aa5.69□□□□□ -1.5
CDH1-203ENST00000561751 IGLV2-18A0A075B6J9 118 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 IGHV3-15A0A0B4J1V0 119 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 TRAV40A0A0B4J280 105 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 A0A0B4J2C4 111 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 LOC389332A0A1B0GUA5 103 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 CRYGDP07320 174 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 CECR9P0C854 216 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 ZNF883P0CG24 379 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 MED14OSP0DP75 135 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 CD40P25942 277 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 GFERP55789 205 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 ZFP2Q6ZN57 461 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
CDH1-203ENST00000561751 WDR86Q86TI4 376 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 CXXC4Q9H2H0 198 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 PROK2Q9HC23 129 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 TMEM160Q9NX00 188 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 GNG12Q9UBI6 72 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 CELSR3Q9NYQ7 3312 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 UNC79Q9P2D8 2635 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 HECTD1Q9ULT8 2610 aa5.68□□□□□ -1.5
CDH1-203ENST00000561751 EML6Q6ZMW3 1958 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 TENM4Q6N022 2769 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 KALRNO60229 2985 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.67□□□□□ -1.5
CDH1-203ENST00000561751 DUX1O43812 170 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 SCGB2A1O75556 95 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 TNFRSF6BO95407 300 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 MFAP4P55083 255 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 DLX6P56179 175 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 SRSF9Q13242 221 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDH1-203ENST00000561751 LAGE3Q14657 143 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 POM121L12Q8N7R1 296 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 DEFB124Q8NES8 71 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 TMEM167AQ8TBQ9 72 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 BBC3Q96PG8 261 aaPredicted RBP5.67□□□□□ -1.5
CDH1-203ENST00000561751 DUX5Q96PT3 197 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 SPRY4Q9C004 299 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 UBTD1Q9HAC8 227 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 MRPL35Q9NZE8 188 aaKnown RBP5.67□□□□□ -1.5
CDH1-203ENST00000561751 ADAMTS20P59510 1910 aa5.67□□□□□ -1.5
CDH1-203ENST00000561751 MYO18BQ8IUG5 2567 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 MED12LQ86YW9 2145 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SPTA1P02549 2419 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 IGHV1OR21-1A0A087WYE8 117 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 IGHV3-20A0A0C4DH32 117 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 LMO7DNF2Z398 122 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 ORM1P02763 201 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 COX6B1P14854 86 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 COX7CP15954 63 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SSR4P51571 173 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 TMEM258P61165 79 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 HERVK_113P61574 105 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 HERVK_113P63121 156 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 ZNF672Q499Z4 452 aaPredicted RBP5.66□□□□□ -1.5
CDH1-203ENST00000561751 ORMDL2Q53FV1 153 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 C9orf153Q5TBE3 101 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 PRNTQ86SH4 94 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SLC25A45Q8N413 288 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 SAP25Q8TEE9 199 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 RNF185Q96GF1 192 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 CALYQ9NYX4 217 aa5.66□□□□□ -1.5
CDH1-203ENST00000561751 ASXL3Q9C0F0 2248 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 TRBV19A0A075B6N1 114 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 H3BMM0 161 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 CXCL13O43927 109 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 RPL7P18124 248 aaKnown RBP5.65□□□□□ -1.5
CDH1-203ENST00000561751 GLRXP35754 106 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 CRIP1P50238 77 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 EMP1P54849 157 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 LINC01620Q4KN68 170 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 LINC00643Q86TS7 51 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 UBALD1Q8TB05 177 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 UBE2WQ96B02 151 aa5.65□□□□□ -1.5
CDH1-203ENST00000561751 IGHV4-4A0A075B6R2 117 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 CYSRT1A8MQ03 144 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 IGHV3-30P01768 117 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 CFC1BP0CG36 223 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 CFC1P0CG37 223 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 IGHV3-30-5P0DP03 117 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 PRDX2P32119 198 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 ZNF134P52741 427 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms