RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 LINC00315P59091 139 aa7.98□□□□□ -1.13
USP3-220ENST00000561381 ATP6V1FQ16864 119 aa7.98□□□□□ -1.13
USP3-220ENST00000561381 C9orf47Q6ZRZ4 202 aa7.98□□□□□ -1.13
USP3-220ENST00000561381 Q8N1X5 172 aa7.98□□□□□ -1.13
USP3-220ENST00000561381 MRPL16Q9NX20 251 aaKnown RBP7.98□□□□□ -1.13
USP3-220ENST00000561381 FAM240BA0A1B0GVZ2 78 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 RGS13O14921 159 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 OR10J4P0C629 311 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 BTF3P20290 206 aaKnown RBP7.97□□□□□ -1.13
USP3-220ENST00000561381 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
USP3-220ENST00000561381 Q8TAT8 98 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 CCDC32Q9BV29 185 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 AAMDCQ9H7C9 122 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 SCRT2Q9NQ03 307 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 ZNF492Q9P255 531 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 TNFRSF18Q9Y5U5 241 aa7.97□□□□□ -1.13
USP3-220ENST00000561381 NBEAP1P0C6P0 100 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.14
USP3-220ENST00000561381 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 OR5C1Q8NGR4 320 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 FXYD5Q96DB9 178 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 PHYHIPLQ96FC7 376 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 OR51M1Q9H341 326 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 OR5AC2Q9NZP5 309 aa7.96□□□□□ -1.14
USP3-220ENST00000561381 IGHV1OR15-1A0A075B7D0 117 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 H0YIZ8 118 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 SIVA1O15304 175 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 NXPH4O95158 308 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 NMBP08949 121 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 LRRC37A5PQ49AS3 106 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 C8orf49Q96NF6 230 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 PAXXQ9BUH6 204 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
USP3-220ENST00000561381 PRAF2O60831 178 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 ZNF138P52744 262 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 CRYBA4P53673 196 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 FHL2Q14192 279 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 MUC21Q5SSG8 566 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 MZT2BQ6NZ67 158 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 ARPC5LQ9BPX5 153 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
USP3-220ENST00000561381 MDFICQ9P1T7 246 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 HHLA3Q9XRX5 114 aa7.94□□□□□ -1.14
USP3-220ENST00000561381 E5RGE8 158 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 EIF3GO75821 320 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP3-220ENST00000561381 SFTA3P0C7M3 94 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 RANP62826 216 aaKnown RBP7.93□□□□□ -1.14
USP3-220ENST00000561381 ASAH1Q13510 395 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 MRPL32Q9BYC8 188 aaKnown RBP7.93□□□□□ -1.14
USP3-220ENST00000561381 SLC25A31Q9H0C2 315 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 NDUFA13Q9P0J0 144 aa7.93□□□□□ -1.14
USP3-220ENST00000561381 OR7C2O60412 319 aa7.92□□□□□ -1.14
USP3-220ENST00000561381 ZNF415Q09FC8 603 aa7.92□□□□□ -1.14
USP3-220ENST00000561381 ZNF266Q14584 549 aa7.92□□□□□ -1.14
USP3-220ENST00000561381 NMES1Q9C002 83 aa7.92□□□□□ -1.14
USP3-220ENST00000561381 DNAH10OSP0CZ25 163 aa7.91□□□□□ -1.14
USP3-220ENST00000561381 UBE2L3P68036 154 aaKnown RBP7.91□□□□□ -1.14
USP3-220ENST00000561381 MRPL23Q16540 153 aaKnown RBP7.91□□□□□ -1.14
USP3-220ENST00000561381 TMEM183BQ1AE95 376 aa7.91□□□□□ -1.14
USP3-220ENST00000561381 TMEM183AQ8IXX5 376 aa7.91□□□□□ -1.14
USP3-220ENST00000561381 ZNF479Q96JC4 524 aa7.91□□□□□ -1.14
USP3-220ENST00000561381 TRGV4A0A0C4DH28 118 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 TRBV7-9A0A0J9YWB2 115 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 RBAKDNA6NC62 111 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 DIRC3C9JPN6 131 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 K7EQD1 137 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 CSN1S1P47710 185 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 H2BFSP57053 126 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 IFITM3Q01628 133 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 SLAQ13239 276 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 FFAR4Q5NUL3 377 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 NEGR1Q7Z3B1 354 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 WFDC10BQ8IUB3 73 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 ENKURQ8TC29 256 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 ATP5SQ99766 215 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 KCNIP2Q9NS61 270 aa7.9□□□□□ -1.14
USP3-220ENST00000561381 C17orf112F2Z3M2 114 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 UPK1BO75841 260 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 GYPEP15421 78 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 XGP55808 180 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 ERVFC1-1P60608 527 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 Q6AWC8 147 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 LYPD1Q8N2G4 141 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 PPP1R1CQ8WVI7 109 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 RASL10AQ92737 203 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 HYLS1Q96M11 299 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 SMIM3Q9BZL3 60 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 RPH3ALQ9UNE2 315 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 HSPB11Q9Y547 144 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 FAT1Q14517 4588 aa7.89□□□□□ -1.15
USP3-220ENST00000561381 LOC100131303A0A0U1RQF7 123 aa7.88□□□□□ -1.15
USP3-220ENST00000561381 INMT-MINDY4F8WBC2 141 aa7.88□□□□□ -1.15
USP3-220ENST00000561381 GNRH2O43555 120 aa7.88□□□□□ -1.15
USP3-220ENST00000561381 SRIP30626 198 aa7.88□□□□□ -1.15
USP3-220ENST00000561381 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
USP3-220ENST00000561381 IQCF2Q8IXL9 164 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms