RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 HYLS1Q96M11 299 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 LYSTQ99698 3801 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 SLC25A22Q9H936 323 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF331Q9NQX6 463 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-220ENST00000561253 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 RPRMQ9NS64 109 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF586Q9NXT0 402 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
LRRC28-220ENST00000561253 TRBV19A0A075B6N1 114 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 A0A0J9YWU9 116 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 C17orf112F2Z3M2 114 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF253O75346 499 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 NXPH4O95158 308 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF688P0C7X2 276 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 PYYP10082 97 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 HIST1H1EP10412 219 aaKnown RBP4.31□□□□□ -1.72
LRRC28-220ENST00000561253 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 GALR1P47211 349 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 TFPI2P48307 235 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 PSMB3P49720 205 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 NKX2-5P52952 324 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-220ENST00000561253 DEFB131AP59861 70 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 FAM78BQ5VT40 261 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 CD164L2Q6UWJ8 174 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF709Q8N972 641 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 MRAPQ8TCY5 172 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 GNPNAT1Q96EK6 184 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-220ENST00000561253 B9D2Q9BPU9 175 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 MRPL32Q9BYC8 188 aaKnown RBP4.31□□□□□ -1.72
LRRC28-220ENST00000561253 UBQLN2Q9UHD9 624 aa4.31□□□□□ -1.72
LRRC28-220ENST00000561253 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 H3BMM0 161 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 H3BTX0 84 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-220ENST00000561253 SNRPCP09234 159 aaKnown RBP4.3□□□□□ -1.72
LRRC28-220ENST00000561253 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 FHITP49789 147 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 MEOX2P50222 304 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 RHOBP62745 196 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 PDE6HQ13956 83 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 HAGHQ16775 308 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 ACOT6Q3I5F7 207 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-220ENST00000561253 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 SBSPONQ8IVN8 264 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 BAP18Q8IXM2 172 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 RNF182Q8N6D2 247 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 Q8NBF4 154 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 OR10G4Q8NGN3 311 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 OR10G9Q8NGN4 311 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 PPP1R14BQ96C90 147 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 GFRA4Q9GZZ7 299 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 HLA-DRB4X5D2U9 266 aa4.3□□□□□ -1.72
LRRC28-220ENST00000561253 KIR2DL5BA0A0G2JN68 375 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 KIR2DL5BA0A0G2JPC4 375 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 A0A0J9YX75 114 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 KANTRA0A1W2PQU2 76 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 F6UB75 175 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 M0R3E3 92 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 MBP02144 154 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 OR10J4P0C629 311 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 NBEAP1P0C6P0 100 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 S100A7P31151 101 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-220ENST00000561253 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-220ENST00000561253 PSG3Q16557 428 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 GUK1Q16774 197 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 TMEM41BQ5BJD5 291 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 PSMG4Q5JS54 123 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 SAMD13Q5VXD3 122 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 LCN15Q6UWW0 184 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 FOXI2Q6ZQN5 318 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 S100A7AQ86SG5 101 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 SLC51BQ86UW2 128 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 KIR2DL5AQ8N109 375 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 KIR2DL5BQ8NHK3 375 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF471Q9BX82 626 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-220ENST00000561253 SAV1Q9H4B6 383 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-220ENST00000561253 RNF24Q9Y225 148 aa4.29□□□□□ -1.72
LRRC28-220ENST00000561253 CTXND1A0A1B0GTU2 59 aa4.28□□□□□ -1.72
LRRC28-220ENST00000561253 ZNF705FA8MVS1 300 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-220ENST00000561253 BOLA2-SMG1P6H3BVE0 249 aa4.28□□□□□ -1.72
LRRC28-220ENST00000561253 HMGB3O15347 200 aaKnown RBP4.28□□□□□ -1.72
LRRC28-220ENST00000561253 ARL14EPLP0DKL9 152 aa4.28□□□□□ -1.72
LRRC28-220ENST00000561253 TPT1P13693 172 aaKnown RBP4.28□□□□□ -1.72
LRRC28-220ENST00000561253 GCHFRP30047 84 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms