RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
SPG21-212ENST00000560878 SLC17A3O00476 420 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 SOCS3O14543 225 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 HMGB3O15347 200 aaKnown RBP3.5□□□□□ -1.85
SPG21-212ENST00000560878 ZNF253O75346 499 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 CXorf1O96002 111 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 SLC25A5P05141 298 aaKnown RBP3.5□□□□□ -1.85
SPG21-212ENST00000560878 SPART-AS1P0CW21 52 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 IGLC2P0DOY2 106 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 HLA-DMBP28068 263 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 CDKN1BP46527 198 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 CLLU1Q5K131 121 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 EXOC3-AS1Q8N2X6 119 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 FAM213BQ8TBF2 198 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 MRPL53Q96EL3 112 aaKnown RBP3.5□□□□□ -1.85
SPG21-212ENST00000560878 LINC00477Q96M19 166 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 NDFIP1Q9BT67 221 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 SLC25A2Q9BXI2 301 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 SH3BGRL3Q9H299 93 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 OTORQ9NRC9 128 aa3.5□□□□□ -1.85
SPG21-212ENST00000560878 TRAV12-2A0A075B6T6 113 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 TRAV12-3A0A0B4J271 114 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 LOC102723971A0A1B0GUV8 181 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 SNURFLB1AK76 121 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 C11orf94C9JXX5 98 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 F6UZH7 168 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 H7BYZ3 331 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 ARL14EPLP0DKL9 152 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 PRB4P10163 310 aaPredicted RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 RNASE4P34096 147 aaKnown RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 SULT1A2P50226 295 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 PPT1P50897 306 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 DAD1P61803 113 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 CASC10Q5T4H9 136 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 DPPA3Q6W0C5 159 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 RPP25LQ8N5L8 163 aaKnown RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 SAT2Q96F10 170 aaPredicted RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 C20orf144Q9BQM9 153 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 NKX6-2Q9C056 277 aaPredicted RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 Q9H3A6 140 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 C11orf68Q9H3H3 251 aaKnown RBP3.49□□□□□ -1.85
SPG21-212ENST00000560878 EDA2RQ9HAV5 297 aa3.49□□□□□ -1.85
SPG21-212ENST00000560878 AGRNO00468 2067 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 TENM2Q9NT68 2774 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 IGKV2-40A0A087WW87 121 aaPredicted RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 TRAV10A0A0B4J240 114 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 CTXND1A0A1B0GTU2 59 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 SERTM2A0A1B0GWG4 89 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 C7orf71A4D174 169 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 MAP1LC3B2A6NCE7 125 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 CBY3A6NI87 242 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 ZNF705GA8MUZ8 300 aaPredicted RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 IGLL5B9A064 214 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 M0R3E3 92 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 MRPS12O15235 138 aaKnown RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 IGKV2D-40P01614 121 aaPredicted RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 NMBP08949 121 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 HTN3P15516 51 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 GCHFRP30047 84 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 ZNF138P52744 262 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 TAS2R60P59551 318 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 NANOS2P60321 138 aaKnown RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 ERCC8Q13216 396 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 CST9LP1Q5W188 147 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 ZNF493Q6ZR52 646 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 GOLT1AQ6ZVE7 132 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 COMMD7Q86VX2 200 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 C2CD4CQ8TF44 421 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 SFT2D1Q8WV19 159 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 PHLDA1Q8WV24 401 aaPredicted RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 PCNPQ8WW12 178 aaKnown RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 RPL36ALQ969Q0 106 aaKnown RBP3.48□□□□□ -1.85
SPG21-212ENST00000560878 FXYD5Q96DB9 178 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 FAM167A-AS1Q96KT0 104 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 MAP1LC3BQ9GZQ8 125 aa3.48□□□□□ -1.85
SPG21-212ENST00000560878 PRKDCP78527 4128 aaKnown RBP3.47□□□□□ -1.85
SPG21-212ENST00000560878 A0A087WWL8 130 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 DEFB131BA0A096LNP1 70 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 A0A1B0GV50 99 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 RBAKDNA6NC62 111 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 LINC00862A6NCI5 91 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 FBLL1A6NHQ2 334 aaKnown RBP3.47□□□□□ -1.85
SPG21-212ENST00000560878 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 EIF3GO75821 320 aaKnown RBP eCLIP3.47□□□□□ -1.85
SPG21-212ENST00000560878 NDUFB4O95168 129 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 NPSP0C0P6 89 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 STAG3L2P0CL84 134 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 CT45A10P0DMU9 189 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 DEFB130BP0DP73 79 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 DEFB130AP0DP74 79 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 FGF8P55075 233 aaPredicted RBP3.47□□□□□ -1.85
SPG21-212ENST00000560878 UBE2G2P60604 165 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 UBE2G1P62253 170 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 FAM222AQ5U5X8 452 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 CEMP1Q6PRD7 247 aaPredicted RBP3.47□□□□□ -1.85
SPG21-212ENST00000560878 FAM159AQ6UWV7 190 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 ZNF705AQ6ZN79 300 aaPredicted RBP3.47□□□□□ -1.85
SPG21-212ENST00000560878 C9orf47Q6ZRZ4 202 aa3.47□□□□□ -1.85
SPG21-212ENST00000560878 SSX7Q7RTT5 188 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms