RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
CSPG4P11-201ENST00000560634 CRLF1O75462 422 aa10.52□□□□□ -0.73
CSPG4P11-201ENST00000560634 LCTP09848 1927 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 CARD19Q96LW7 228 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 LENEPQ9Y5L5 61 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 VOPP1Q96AW1 172 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 C15orf65H3BRN8 121 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 NXPH4O95158 308 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRR20EP86478 221 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRR20CP86479 221 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRR20DP86480 221 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRR20BP86481 221 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRR20AP86496 221 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 RUSC1-AS1Q66K80 236 aa10.51□□□□□ -0.73
CSPG4P11-201ENST00000560634 THADAQ6YHU6 1953 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 J3QLI3 93 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 GAGE7O76087 117 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGFL3Q6UXB1 125 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 GAGE6Q13070 117 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 CITED2Q99967 270 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 NDUFS7O75251 213 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 ELANEP08246 267 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 APOC4P55056 127 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 RHOHQ15669 191 aa10.5□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGLV3-9A0A075B6K5 115 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGHG4P01861 327 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 ANKRD29Q8N6D5 301 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 WIPF2Q8TF74 440 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 DOCK8Q8NF50 2099 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 H3BUA1 57 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZNF134P52741 427 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 KAAG1Q9UBP8 84 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 A0A0G2JMZ2 1700 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 LRRC37A2A6NM11 1700 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
CSPG4P11-201ENST00000560634 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 SCN5AQ14524 2016 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 H3BMG7 143 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGLV1-44P01699 117 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 WDR86Q86TI4 376 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 CFHR3Q02985 330 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 TMEM258P61165 79 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 IL15RAQ13261 267 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZNF747Q9BV97 191 aa10.48□□□□□ -0.73
CSPG4P11-201ENST00000560634 LTAP01374 205 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 C8orf31Q8N9H6 132 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 TRPM7Q96QT4 1865 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 CFC1BP0CG36 223 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 CFC1P0CG37 223 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 PRSS29PA6NIE9 313 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 K7ENP7 123 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
CSPG4P11-201ENST00000560634 MED13LQ71F56 2210 aa10.46□□□□□ -0.73
CSPG4P11-201ENST00000560634 TRAV12-2A0A075B6T6 113 aa10.46□□□□□ -0.73
CSPG4P11-201ENST00000560634 NTN5Q8WTR8 489 aaPredicted RBP10.46□□□□□ -0.74
CSPG4P11-201ENST00000560634 RBAKDNA6NC62 111 aa10.46□□□□□ -0.74
CSPG4P11-201ENST00000560634 ACYP1P07311 99 aa10.46□□□□□ -0.74
CSPG4P11-201ENST00000560634 COA6Q5JTJ3 125 aaKnown RBP10.46□□□□□ -0.74
CSPG4P11-201ENST00000560634 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 PROK2Q9HC23 129 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 PCNX1Q96RV3 2341 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 Q8NFD4 153 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 LYPD6BQ8NI32 183 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 IGLV3-1P01715 115 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 HERV-K104P63124 156 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 RSPO1Q2MKA7 263 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 MALRD1Q5VYJ5 2156 aa10.45□□□□□ -0.74
CSPG4P11-201ENST00000560634 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 CFHR4Q92496 578 aa10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 TPSG1Q9NRR2 321 aa10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 CRYBA4P53673 196 aa10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 CR1LQ2VPA4 569 aa10.44□□□□□ -0.74
CSPG4P11-201ENST00000560634 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 AGPAT4-IT1Q9H0P7 198 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 SHISA9B4DS77 424 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms