RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 E5RGE8 158 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 BAXQ07812 192 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 ASAH1Q13510 395 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 PDE6HQ13956 83 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 GPN1Q9HCN4 374 aaPredicted RBP11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 TRBV19A0A075B6N1 114 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 IGSF23A1L1A6 192 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 C1QBP02746 253 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 S100A10P60903 97 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 Q8N814 137 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 VGLL1Q99990 258 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 ARPC5LQ9BPX5 153 aa11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
TSPAN3-208ENST00000560514 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 RGS13O14921 159 aa11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 CYCSP99999 105 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 FHL2Q14192 279 aa11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 IBA57Q5T440 356 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 SLC25A31Q9H0C2 315 aa11.97□□□□□ -0.49
TSPAN3-208ENST00000560514 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 K7EQD1 137 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 FGF7P21781 194 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 BTN1A1Q13410 526 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 TXNDC17Q9BRA2 123 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 NMES1Q9C002 83 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
TSPAN3-208ENST00000560514 HMCN2Q8NDA2 5059 aa11.96□□□□□ -0.5
TSPAN3-208ENST00000560514 ORM1P02763 201 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 GPX1P07203 203 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 NMBP08949 121 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 GYPEP15421 78 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 CD300CQ08708 224 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 NPCDR1Q9BY65 106 aa11.95□□□□□ -0.5
TSPAN3-208ENST00000560514 KLLNB2CW77 178 aa11.94□□□□□ -0.5
TSPAN3-208ENST00000560514 NDUFB4O95168 129 aa11.94□□□□□ -0.5
TSPAN3-208ENST00000560514 ERCC8Q13216 396 aa11.94□□□□□ -0.5
TSPAN3-208ENST00000560514 NHLH2Q02577 135 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 ENKURQ8TC29 256 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
TSPAN3-208ENST00000560514 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 C9JCJ5 164 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 UPK1BO75841 260 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 CRISP2P16562 243 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 OR5C1Q8NGR4 320 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 Q9HAA7 133 aa11.92□□□□□ -0.5
TSPAN3-208ENST00000560514 IGHV1OR15-1A0A075B7D0 117 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 TRBV7-9A0A0J9YWB2 115 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 M0R3E3 92 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 OXTP01178 125 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 OR51M1Q9H341 326 aa11.91□□□□□ -0.5
TSPAN3-208ENST00000560514 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 PPT1P50897 306 aa11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 IQCF2Q8IXL9 164 aa11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 SLC25A2Q9BXI2 301 aa11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 WDR61Q9GZS3 305 aaKnown RBP11.9□□□□□ -0.5
TSPAN3-208ENST00000560514 IBA57-AS1B1ANH7 110 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 C17orf112F2Z3M2 114 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 PYYP10082 97 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 GCSAMLQ5JQS6 135 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 BLNKQ8WV28 456 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 ZNF479Q96JC4 524 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
TSPAN3-208ENST00000560514 A6NHS1 94 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 H0YIZ8 118 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 SIX6O95475 246 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 LINC01556Q5JQF7 62 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 TMEM78Q5T7P6 136 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 NHLRC2Q8NBF2 726 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
TSPAN3-208ENST00000560514 TRAV8-6A0A0B4J262 113 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 Q6ZSA8 131 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 MIR17HGQ75NE6 70 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
TSPAN3-208ENST00000560514 RBAKDNA6NC62 111 aa11.86□□□□□ -0.51
TSPAN3-208ENST00000560514 IFITM3Q01628 133 aa11.86□□□□□ -0.51
TSPAN3-208ENST00000560514 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
TSPAN3-208ENST00000560514 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
TSPAN3-208ENST00000560514 LRP1Q07954 4544 aaKnown RBP11.86□□□□□ -0.51
TSPAN3-208ENST00000560514 PET100P0DJ07 73 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms