RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GAGE7O76087 117 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE12FP0CL80 117 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE12GP0CL81 117 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE12IP0CL82 117 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 Q86TA4 180 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 ZNF524Q96C55 264 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 SPXQ9BT56 116 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 PRR31Q5SQ13 230 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 LY6G5BQ8NDX9 201 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 ZNF462Q96JM2 2506 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE1Q13065 139 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE4Q13068 117 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE5Q13069 117 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE13Q4V321 117 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 SNHG12Q9BXW3 62 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 IGFL2Q6UWQ7 119 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 ANKRD11Q6UB99 2663 aaPredicted RBP10.74□□□□□ -0.69
TRAF3-208ENST00000560371 OCIAD2Q56VL3 154 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 LEPROTO15243 131 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
TRAF3-208ENST00000560371 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
TRAF3-208ENST00000560371 C22orf46C9J442 243 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 H3BMM0 161 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.73□□□□□ -0.69
TRAF3-208ENST00000560371 RSPO1Q2MKA7 263 aaPredicted RBP10.73□□□□□ -0.69
TRAF3-208ENST00000560371 UBE2WQ96B02 151 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 TPSG1Q9NRR2 321 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 C15orf65H3BRN8 121 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 CXCL1P09341 107 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
TRAF3-208ENST00000560371 TRAV25A0A0B4J276 109 aa10.73□□□□□ -0.69
TRAF3-208ENST00000560371 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
TRAF3-208ENST00000560371 CFPP27918 469 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 WT1-ASQ06250 92 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 EML5Q05BV3 1969 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 TRBV19A0A075B6N1 114 aa10.72□□□□□ -0.69
TRAF3-208ENST00000560371 ZNF134P52741 427 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 HIST1H2BLQ99880 126 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 IGHV2-70P01814 119 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 PAX9P55771 341 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 FAM120AOSQ5T036 256 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 IGHV4-30-2A0A087WSY4 118 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 CD5LO43866 347 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
TRAF3-208ENST00000560371 LYL1P12980 280 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 HSD52Q0P140 79 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 NKAPP1Q8N9T2 125 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 GFRA4Q9GZZ7 299 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 DIAPH2-AS1Q14236 149 aa10.71□□□□□ -0.7
TRAF3-208ENST00000560371 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
TRAF3-208ENST00000560371 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
TRAF3-208ENST00000560371 GOLGB1Q14789 3259 aaKnown RBP10.7□□□□□ -0.7
TRAF3-208ENST00000560371 IGF2BP2-AS1Q96M15 143 aa10.7□□□□□ -0.7
TRAF3-208ENST00000560371 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
TRAF3-208ENST00000560371 HAPLN4Q86UW8 402 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 SLAQ13239 276 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 I3L3M4 83 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 RMI2Q96E14 147 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 ZNF479Q96JC4 524 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 H3BUA1 57 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 GAGE2AQ6NT46 116 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 GUSBP1Q15486 140 aa10.69□□□□□ -0.7
TRAF3-208ENST00000560371 VWC2Q2TAL6 325 aa10.68□□□□□ -0.7
TRAF3-208ENST00000560371 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
TRAF3-208ENST00000560371 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
TRAF3-208ENST00000560371 C1orf147Q96MC9 270 aaPredicted RBP10.68□□□□□ -0.7
TRAF3-208ENST00000560371 NUP210LQ5VU65 1888 aa10.68□□□□□ -0.7
TRAF3-208ENST00000560371 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
TRAF3-208ENST00000560371 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 PRR25Q96S07 402 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 BCL6BQ8N143 479 aaPredicted RBP10.67□□□□□ -0.7
TRAF3-208ENST00000560371 USP9XQ93008 2570 aaPredicted RBP10.67□□□□□ -0.7
TRAF3-208ENST00000560371 ANGP03950 147 aaKnown RBP10.67□□□□□ -0.7
TRAF3-208ENST00000560371 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 CTSZQ9UBR2 303 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 TP53TG1Q9Y2A0 90 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 A0A1B0GUS0 222 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 NRGNQ92686 78 aa10.67□□□□□ -0.7
TRAF3-208ENST00000560371 SYS1-DBNDD2H3BUS1 97 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 H3BRN7 92 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 GAGE6Q13070 117 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 DKK4Q9UBT3 224 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
TRAF3-208ENST00000560371 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms