RNA–Protein interactions for RNA: ENST00000560056.1

AC040918.1-201, humanhuman

TSL 2 BASIC

Gene AC040918.1, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040918.1-201ENST00000560056 KLF12Q9Y4X4 402 aa4.47□□□□□ -1.69
AC040918.1-201ENST00000560056 RYR3Q15413 4870 aa4.47□□□□□ -1.69
AC040918.1-201ENST00000560056 MUC4Q99102 2169 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 A8MTW9 85 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 F6UZH7 168 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 NDUFS6O75380 124 aaKnown RBP4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 RPL35P42766 123 aaKnown RBP4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 MEOX2P50222 304 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 DEFB131AP59861 70 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 PSG9Q00887 426 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 PEA15Q15121 130 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 ZNF674Q2M3X9 581 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 PSMG4Q5JS54 123 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 AMTNQ6UX39 209 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 LINC00322Q6ZN03 302 aaPredicted RBP4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 APRG1Q8IVJ8 170 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 ZNF738Q8NE65 137 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 MRPL53Q96EL3 112 aaKnown RBP4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 FAM19A4Q96LR4 140 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 ATG101Q9BSB4 218 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 EDA2RQ9HAV5 297 aa4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 CARHSP1Q9Y2V2 147 aaKnown RBP4.46□□□□□ -1.7
AC040918.1-201ENST00000560056 TRAV2A0A0B4J234 112 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TRAV25A0A0B4J276 109 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 A0A0J9YX75 114 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 PDE6DO43924 150 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TAGLN2P37802 199 aaKnown RBP4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 AKR1C3P42330 323 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 CRIP1P50238 77 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 ZNF80P51504 273 aaPredicted RBP4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 RPL23P62829 140 aaKnown RBP4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TMEM183BQ1AE95 376 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 RBPMS2Q6ZRY4 209 aaKnown RBP4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 S100A7AQ86SG5 101 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 ZFAND2AQ8N6M9 145 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TMEM75Q8N9X5 138 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 OR8A1Q8NGG7 326 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 OR2K2Q8NGT1 345 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 SPAG8Q99932 426 aaPredicted RBP4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 SMIM7Q9BQ49 75 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TXNDC17Q9BRA2 123 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 SDF2L1Q9HCN8 221 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 PSG8Q9UQ74 426 aa4.45□□□□□ -1.7
AC040918.1-201ENST00000560056 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 ZNF727A8MUV8 499 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 C9JCJ5 164 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 F8W036 122 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 DNASE2O00115 360 aaPredicted RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 SCO1O75880 301 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 LTAP01374 205 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 GIG44P09565 113 aaPredicted RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 RBMY1CP0DJD4 496 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 S100A7P31151 101 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 BMI1P35226 326 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 CNN1P51911 297 aaKnown RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 FLI1Q01543 452 aaPredicted RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 HIST1H1AQ02539 215 aaPredicted RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 OR5I1Q13606 314 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 RBMY1FQ15415 496 aaKnown RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 SOHLH1Q5JUK2 328 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 C9orf47Q6ZRZ4 202 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 PRNTQ86SH4 94 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 LINC01551Q86U37 167 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 CMTM2Q8TAZ6 248 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 HIST1H2BAQ96A08 127 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 SEC11CQ9BY50 192 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 SAV1Q9H4B6 383 aaPredicted RBP4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 SMDT1Q9H4I9 107 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 AAMDCQ9H7C9 122 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 RNF24Q9Y225 148 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 PRELID1Q9Y255 219 aa4.44□□□□□ -1.7
AC040918.1-201ENST00000560056 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 C19orf71A6NCJ1 209 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 OR4C46A6NHA9 309 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 H3BMM0 161 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 CRXO43186 299 aaPredicted RBP4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 IGKV3-20P01619 116 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 APOC3P02656 99 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 HLA-DRB4P13762 266 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 FXYD7P58549 80 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 TAS2R60P59551 318 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 FOXI2Q6ZQN5 318 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 TRPT1Q86TN4 253 aaKnown RBP4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 DEFB125Q8N687 156 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 ARL6IP6Q8N6S5 226 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 ISOC2Q96AB3 205 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 FMC1Q96HJ9 113 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 TCEAL7Q9BRU2 100 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 NKX6-2Q9C056 277 aaPredicted RBP4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 ZNF492Q9P255 531 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 NAT8Q9UHE5 227 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 HLA-DRB4X5D2U9 266 aa4.43□□□□□ -1.7
AC040918.1-201ENST00000560056 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms