RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 XCL2Q9UBD3 114 aa6.33□□□□□ -1.4
LRRC28-215ENST00000559774 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 C9JCJ5 164 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 ZNF324O75467 553 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-215ENST00000559774 MIFP14174 115 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 RPL35P42766 123 aaKnown RBP6.32□□□□□ -1.4
LRRC28-215ENST00000559774 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 PRNTQ86SH4 94 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 Q86TA4 180 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 TMEM183AQ8IXX5 376 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 ASCL2Q99929 193 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 BIN3Q9NQY0 253 aa6.32□□□□□ -1.4
LRRC28-215ENST00000559774 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
LRRC28-215ENST00000559774 RNASE4P34096 147 aaKnown RBP6.31□□□□□ -1.4
LRRC28-215ENST00000559774 DEFB135Q30KP9 77 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 TDRG1Q3Y452 100 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 UQCC3Q6UW78 93 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 ZNF493Q6ZR52 646 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 BAGE2Q86Y30 109 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 C1orf158Q8N1D5 194 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 EIF4E3Q8N5X7 224 aaKnown RBP6.31□□□□□ -1.4
LRRC28-215ENST00000559774 Q8TAT8 98 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 TMEM208Q9BTX3 173 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
LRRC28-215ENST00000559774 TRAV12-2A0A075B6T6 113 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 TRAV12-3A0A0B4J271 114 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 FABP5P3A8MUU1 101 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 SRP19P09132 144 aaKnown RBP6.3□□□□□ -1.4
LRRC28-215ENST00000559774 GNG4P50150 75 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 FXYD7P58549 80 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 ANXA2RQ3ZCQ2 193 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 OR11H2Q8NH07 326 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 PCNPQ8WW12 178 aaKnown RBP6.3□□□□□ -1.4
LRRC28-215ENST00000559774 KCNS1Q96KK3 526 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 LINC01587Q99440 93 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
LRRC28-215ENST00000559774 GCGP01275 180 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-215ENST00000559774 BTN1A1Q13410 526 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 RRN3P1Q2M238 152 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 ZNF674Q2M3X9 581 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 FAM159AQ6UWV7 190 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 PARLQ9H300 379 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 C11orf68Q9H3H3 251 aaKnown RBP6.29□□□□□ -1.4
LRRC28-215ENST00000559774 X6R8D5 127 aa6.29□□□□□ -1.4
LRRC28-215ENST00000559774 IGHV1OR15-1A0A075B7D0 117 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 RBMY1A1P0DJD3 496 aaKnown RBP6.28□□□□□ -1.4
LRRC28-215ENST00000559774 RBMY1CP0DJD4 496 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 RBMY1FQ15415 496 aaKnown RBP6.28□□□□□ -1.4
LRRC28-215ENST00000559774 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 SOHLH1Q5JUK2 328 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 IBA57Q5T440 356 aaKnown RBP6.28□□□□□ -1.4
LRRC28-215ENST00000559774 PRR9Q5T870 116 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 TMEM263Q8WUH6 116 aaKnown RBP6.28□□□□□ -1.4
LRRC28-215ENST00000559774 C16orf74Q96GX8 76 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 U3KQK5 164 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 NBEAL2Q6ZNJ1 2754 aa6.28□□□□□ -1.4
LRRC28-215ENST00000559774 AGRNO00468 2067 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 TRBV20OR9-2A0A075B6H5 130 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 ZNF727A8MUV8 499 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 J3KRW8 73 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 CXCL1P09341 107 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 CRIP1P50238 77 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 SRSF3P84103 164 aaKnown RBP6.27□□□□□ -1.41
LRRC28-215ENST00000559774 TMEM241Q24JQ0 296 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 DNLZQ5SXM8 178 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 Q8NAQ8 132 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 ZC2HC1AQ96GY0 325 aa6.27□□□□□ -1.41
LRRC28-215ENST00000559774 PRKDCP78527 4128 aaKnown RBP6.27□□□□□ -1.41
LRRC28-215ENST00000559774 CBY3A6NI87 242 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 C9JQL5 133 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 ZNF80P51504 273 aaPredicted RBP6.26□□□□□ -1.41
LRRC28-215ENST00000559774 DAZ2Q13117 558 aaKnown RBP6.26□□□□□ -1.41
LRRC28-215ENST00000559774 LINC01559Q495D7 138 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 FAM231DQ6ZW35 169 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
LRRC28-215ENST00000559774 DAZAP1Q96EP5 407 aaKnown RBP6.26□□□□□ -1.41
LRRC28-215ENST00000559774 SPXQ9BT56 116 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 SDF2L1Q9HCN8 221 aa6.26□□□□□ -1.41
LRRC28-215ENST00000559774 RETNQ9HD89 108 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms