RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 BLNKQ8WV28 456 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 ASB13Q8WXK3 278 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 MRPL16Q9NX20 251 aaKnown RBP8.91□□□□□ -0.98
TPM1-220ENST00000559556 TP53TG3Q9ULZ0 132 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 TRBV7-9A0A0J9YWB2 115 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 IGHV3-53P01767 116 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 DNAH10OSP0CZ25 163 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.98
TPM1-220ENST00000559556 S100A10P60903 97 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 RAB32Q13637 225 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 FHL2Q14192 279 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 GCSAMLQ5JQS6 135 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 LYPD5Q6UWN5 251 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 Q6ZQT7 251 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 NEGR1Q7Z3B1 354 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 FAM167A-AS1Q96KT0 104 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 ARPC5LQ9BPX5 153 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 SLC25A2Q9BXI2 301 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 NPCDR1Q9BY65 106 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 ZNF492Q9P255 531 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 TNFRSF18Q9Y5U5 241 aa8.9□□□□□ -0.98
TPM1-220ENST00000559556 A0A087WTM6 91 aa8.89□□□□□ -0.99
TPM1-220ENST00000559556 K7EP13 123 aa8.89□□□□□ -0.99
TPM1-220ENST00000559556 CYCSP99999 105 aaKnown RBP8.89□□□□□ -0.99
TPM1-220ENST00000559556 FAM122CQ6P4D5 195 aa8.89□□□□□ -0.99
TPM1-220ENST00000559556 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
TPM1-220ENST00000559556 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
TPM1-220ENST00000559556 hCG_2014768A0A024R1R8 64 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 NBEAP1P0C6P0 100 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 ZNF138P52744 262 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 Q5VSD8 79 aa8.88□□□□□ -0.99
TPM1-220ENST00000559556 MRPL32Q9BYC8 188 aaKnown RBP8.88□□□□□ -0.99
TPM1-220ENST00000559556 A0A1B0GVG6 124 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 K7EQD1 137 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 KRTAP10-1P60331 282 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 MIR17HGQ75NE6 70 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 WFDC10BQ8IUB3 73 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 IQCF2Q8IXL9 164 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 Q8TAT8 98 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 PHYHIPLQ96FC7 376 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 MSRB1Q9NZV6 116 aa8.87□□□□□ -0.99
TPM1-220ENST00000559556 TRGV4A0A0C4DH28 118 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 E5RGE8 158 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 IFNA5P01569 189 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 SRIP30626 198 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 ZNF266Q14584 549 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 OR5C1Q8NGR4 320 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 FRZBQ92765 325 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 FXYD5Q96DB9 178 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 OR51M1Q9H341 326 aa8.86□□□□□ -0.99
TPM1-220ENST00000559556 PFDN1O60925 122 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 OR10J4P0C629 311 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 SFTA3P0C7M3 94 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 EVI2AP22794 236 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 NHLH2Q02577 135 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 Q6AWC8 147 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 AKAP14Q86UN6 197 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 THAP6Q8TBB0 222 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 RASL10AQ92737 203 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 ZNF479Q96JC4 524 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 SPXQ9BT56 116 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 NMES1Q9C002 83 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 KCNIP2Q9NS61 270 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
TPM1-220ENST00000559556 ORM1P02763 201 aa8.84□□□□□ -0.99
TPM1-220ENST00000559556 GIPP09681 153 aaPredicted RBP8.84□□□□□ -0.99
TPM1-220ENST00000559556 GYPEP15421 78 aa8.84□□□□□ -0.99
TPM1-220ENST00000559556 MUC21Q5SSG8 566 aa8.84□□□□□ -0.99
TPM1-220ENST00000559556 PCNPQ8WW12 178 aaKnown RBP8.84□□□□□ -0.99
TPM1-220ENST00000559556 TRGV11A0A075B6L2 103 aa8.83□□□□□ -1
TPM1-220ENST00000559556 C9JCJ5 164 aa8.83□□□□□ -1
TPM1-220ENST00000559556 PET100P0DJ07 73 aa8.83□□□□□ -1
TPM1-220ENST00000559556 CSN1S1P47710 185 aa8.83□□□□□ -1
TPM1-220ENST00000559556 TMEM183BQ1AE95 376 aa8.83□□□□□ -1
TPM1-220ENST00000559556 TDRG1Q3Y452 100 aa8.83□□□□□ -1
TPM1-220ENST00000559556 TMEM183AQ8IXX5 376 aa8.83□□□□□ -1
TPM1-220ENST00000559556 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
TPM1-220ENST00000559556 TXNDC17Q9BRA2 123 aa8.83□□□□□ -1
TPM1-220ENST00000559556 SLC25A31Q9H0C2 315 aa8.83□□□□□ -1
TPM1-220ENST00000559556 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
TPM1-220ENST00000559556 OR7C2O60412 319 aa8.82□□□□□ -1
TPM1-220ENST00000559556 CRYGDP07320 174 aa8.82□□□□□ -1
TPM1-220ENST00000559556 GCSHP23434 173 aa8.82□□□□□ -1
TPM1-220ENST00000559556 H2BFSP57053 126 aa8.82□□□□□ -1
TPM1-220ENST00000559556 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
TPM1-220ENST00000559556 TMED6Q8WW62 240 aa8.82□□□□□ -1
TPM1-220ENST00000559556 WDR61Q9GZS3 305 aaKnown RBP8.82□□□□□ -1
TPM1-220ENST00000559556 DIRC3C9JPN6 131 aa8.81□□□□□ -1
TPM1-220ENST00000559556 SIX6O95475 246 aa8.81□□□□□ -1
TPM1-220ENST00000559556 RANP62826 216 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms