RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 M0QZK8 103 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 NDUFA4O00483 81 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 IGLC3P0DOY3 106 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 PF4V1P10720 104 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 TWIST1Q15672 202 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
SPG11-217ENST00000559511 Q5PR19 223 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 GPHB5Q86YW7 130 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 USMG5Q96IX5 58 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
SPG11-217ENST00000559511 DEFB112Q30KQ8 113 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 TMEM95Q3KNT9 176 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 FAM106AQ4KMX7 169 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 C16orf92Q96LL3 132 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 C11orf21Q9P2W6 132 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 NAV2Q8IVL1 2488 aa8.43□□□□□ -1.06
SPG11-217ENST00000559511 TRAV9-2A0A087WT02 112 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 CFHR3Q02985 330 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 Q6ZQT7 251 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 OR4X2Q8NGF9 303 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 CNFNQ9BYD5 112 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 LOC389332A0A1B0GUA5 103 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 OR5AL1P0C617 328 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 ORMDL3Q8N138 153 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 PRSS3P2Q8NHM4 247 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 SIGLEC8Q9NYZ4 499 aa8.42□□□□□ -1.06
SPG11-217ENST00000559511 TIMM8BQ9Y5J9 83 aaPredicted RBP8.42□□□□□ -1.06
SPG11-217ENST00000559511 IGHV4-59P01825 116 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 IGLL1P15814 213 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
SPG11-217ENST00000559511 C9orf139Q6ZV77 190 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 FA2HQ7L5A8 372 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 UQCR10Q9UDW1 63 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 A0A096LNJ9 63 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 OR4C46A6NHA9 309 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 SOCS3O14543 225 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 FSHBP01225 129 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
SPG11-217ENST00000559511 FOXE3Q13461 319 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 PRR9Q5T870 116 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
SPG11-217ENST00000559511 RNF185Q96GF1 192 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 Q96MF0 132 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
SPG11-217ENST00000559511 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 TEX15Q9BXT5 2789 aa8.41□□□□□ -1.06
SPG11-217ENST00000559511 NCR2O95944 276 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 NPYP01303 97 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 PLA2G2AP14555 144 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 DEFB1P60022 68 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 CYB5R2Q6BCY4 276 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 KLHDC1Q8N7A1 406 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 SELENOKQ9Y6D0 94 aa8.4□□□□□ -1.06
SPG11-217ENST00000559511 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 CKS2P33552 79 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 TM4SF20Q53R12 229 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 Q6ZN92 141 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
SPG11-217ENST00000559511 A0A0G2JLM5 398 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 H0Y8G0 127 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 EDN2P20800 178 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 PRSS57Q6UWY2 283 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 ZNF747Q9BV97 191 aa8.39□□□□□ -1.07
SPG11-217ENST00000559511 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 C20orf202A1L168 122 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 BATFQ16520 125 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 PET117Q6UWS5 81 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 J3QKU1 62 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 HNRNPA3P51991 378 aaKnown RBP8.38□□□□□ -1.07
SPG11-217ENST00000559511 FXYD7P58549 80 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 RPL11P62913 178 aaKnown RBP8.38□□□□□ -1.07
SPG11-217ENST00000559511 RHPN1-AS1Q9BWJ2 59 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 TP73-AS1Q9UF72 201 aa8.38□□□□□ -1.07
SPG11-217ENST00000559511 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
SPG11-217ENST00000559511 CREBBPQ92793 2442 aa8.37□□□□□ -1.07
SPG11-217ENST00000559511 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
SPG11-217ENST00000559511 J3KRW8 73 aa8.37□□□□□ -1.07
SPG11-217ENST00000559511 PSMB8P28062 276 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms