RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 A6NDN8 102 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 IGF2RP11717 2491 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 Q6ZQT7 251 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 PIFOQ8TCI5 191 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 METTL26Q96S19 204 aa12.72□□□□□ -0.37
SPG11-215ENST00000559193 IGKV2D-26A0A0A0MRZ7 120 aa12.71□□□□□ -0.37
SPG11-215ENST00000559193 ATRXP46100 2492 aa12.71□□□□□ -0.37
SPG11-215ENST00000559193 Q8N8P6 123 aa12.71□□□□□ -0.37
SPG11-215ENST00000559193 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
SPG11-215ENST00000559193 GAGE12BA1L429 117 aa12.71□□□□□ -0.38
SPG11-215ENST00000559193 HHLA3Q9XRX5 114 aa12.71□□□□□ -0.38
SPG11-215ENST00000559193 U3KQE9 123 aa12.71□□□□□ -0.38
SPG11-215ENST00000559193 TRBV7-1A0A0A6YYK4 115 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 LMO4P61968 165 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 C5orf56Q8N8D9 126 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 UBTD1Q9HAC8 227 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 ASH1LQ9NR48 2969 aaKnown RBP12.7□□□□□ -0.38
SPG11-215ENST00000559193 UCNP55089 124 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 UFSP1Q6NVU6 142 aa12.7□□□□□ -0.38
SPG11-215ENST00000559193 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
SPG11-215ENST00000559193 GAGE10A6NGK3 116 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 NPFFO15130 113 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 PRSS1P07477 247 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 NRACQ8N912 160 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 NAA38Q9BRA0 125 aaKnown RBP12.69□□□□□ -0.38
SPG11-215ENST00000559193 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 H3BUT2 72 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 EFNA4P52798 201 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 FOXC2Q99958 501 aa12.69□□□□□ -0.38
SPG11-215ENST00000559193 CACNA1BQ00975 2339 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 PRR9Q5T870 116 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 TMEM219Q86XT9 240 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
SPG11-215ENST00000559193 A0A0G2JLM5 398 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 IGKCP01834 107 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 ATP5G2Q06055 141 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 AP1S3Q96PC3 154 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 COTL1Q14019 142 aa12.67□□□□□ -0.38
SPG11-215ENST00000559193 IGHV4-4A0A075B6R2 117 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 TM4SF20Q53R12 229 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 RAB37Q96AX2 223 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 ATP5LO75964 103 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 C19orf54Q5BKX5 351 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 SMIM15Q7Z3B0 74 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 LINC00527Q9UJ94 153 aa12.66□□□□□ -0.38
SPG11-215ENST00000559193 K7EP34 96 aa12.65□□□□□ -0.38
SPG11-215ENST00000559193 DPM2O94777 84 aa12.65□□□□□ -0.38
SPG11-215ENST00000559193 GTF2H5Q6ZYL4 71 aa12.65□□□□□ -0.38
SPG11-215ENST00000559193 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
SPG11-215ENST00000559193 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
SPG11-215ENST00000559193 TRAV41A0A0B4J266 112 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 TMEM8BA6NDV4 472 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 H3BVH4 76 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 IGF1P05019 195 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 LAGE3Q14657 143 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 SPANXN1Q5VSR9 72 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 HIGD1BQ9P298 99 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 SMPXQ9UHP9 88 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 SELENOKQ9Y6D0 94 aa12.65□□□□□ -0.39
SPG11-215ENST00000559193 ZC2HC1BQ5TFG8 222 aa12.64□□□□□ -0.39
SPG11-215ENST00000559193 IGHV3OR16-10A0A075B7F0 116 aa12.64□□□□□ -0.39
SPG11-215ENST00000559193 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
SPG11-215ENST00000559193 FXYD2P54710 66 aa12.63□□□□□ -0.39
SPG11-215ENST00000559193 C9orf139Q6ZV77 190 aa12.63□□□□□ -0.39
SPG11-215ENST00000559193 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
SPG11-215ENST00000559193 MRPL35Q9NZE8 188 aaKnown RBP12.63□□□□□ -0.39
SPG11-215ENST00000559193 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
SPG11-215ENST00000559193 TRAV40A0A0B4J280 105 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 FAM223BA6NKX1 122 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 GCSHP23434 173 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 FAM223AQ8IWN6 122 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 VPS25Q9BRG1 176 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
SPG11-215ENST00000559193 COL6A6A6NMZ7 2263 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 TRBV25-1A0A075B6N4 114 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 J3KRW8 73 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 UNQ9165/PRO28630Q6UXU0 137 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms