RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 PRADC1Q9BSG0 188 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 MRPL32Q9BYC8 188 aaKnown RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LINC00470Q9BZP3 86 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 OSTCQ9NRP0 149 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 MRPL16Q9NX20 251 aaKnown RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 NAT8Q9UHE5 227 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 TNFSF18Q9UNG2 199 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 BAIAP2Q9UQB8 552 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 URB1O60287 2271 aaKnown RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 NUP98P52948 1817 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 NYNRINQ9P2P1 1898 aaKnown RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 NSD3Q9BZ95 1437 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 LCTP09848 1927 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 PTPRSQ13332 1948 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 SDK1Q7Z5N4 2213 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 IGHV3-73A0A0B4J1V6 119 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 GRIFINA4D1Z8 144 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 C17orf51A8MQB3 221 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 FAM25AB3EWG3 89 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 FAM25CB3EWG5 89 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 FAM25GB3EWG6 89 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 H3BT86 120 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 K7ERU9 68 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 UBFD1O14562 309 aaKnown RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 NPYP01303 97 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 IFNGP01579 166 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 C1QAP02745 245 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 IL4P05112 153 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 RNASE4P34096 147 aaKnown RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 EMX2Q04743 252 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF816Q0VGE8 651 aaPredicted RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 BIKQ13323 160 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 TMEM69Q5SWH9 247 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 Q6ZQT7 251 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 LINC00305Q7Z4B0 112 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 MUC7Q8TAX7 377 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 FGF13Q92913 245 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 HIST1H2BLQ99880 126 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 MIEN1Q9BRT3 115 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 TCEAL7Q9BRU2 100 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 ADAT1Q9BUB4 502 aaKnown RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 TCEAL2Q9H3H9 227 aaPredicted RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 SMDT1Q9H4I9 107 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 GNG8Q9UK08 70 aa2.09□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF443Q9Y2A4 671 aaPredicted RBP2.09□□□□□ -2.07
LRRC28-212ENST00000558911 DSPPQ9NZW4 1301 aa2.09□□□□□ -2.08
LRRC28-212ENST00000558911 GREB1Q4ZG55 1949 aa2.09□□□□□ -2.08
LRRC28-212ENST00000558911 TMEM2Q9UHN6 1383 aa2.09□□□□□ -2.08
LRRC28-212ENST00000558911 AFDNP55196 1824 aaKnown RBP2.08□□□□□ -2.08
LRRC28-212ENST00000558911 WNK3Q9BYP7 1800 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 KIF26AQ9ULI4 1882 aaPredicted RBP2.08□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF407Q9C0G0 2248 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 IGHV1-58A0A0C4DH39 117 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 C16orf90A8MZG2 172 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 J3QR89 54 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 XCL1P47992 114 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 EIF2B2P49770 351 aaKnown RBP2.08□□□□□ -2.08
LRRC28-212ENST00000558911 NDUFA6P56556 154 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 MAXP61244 160 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF141Q15928 474 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 MIAQ16674 131 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 LINC00483Q53H64 154 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 TMEM244Q5VVB8 128 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF695Q8IW36 515 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 SIGLECL1Q8N7X8 197 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 SMCR5Q8TEV8 140 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 SCGB3A1Q96QR1 104 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 IMMP2LQ96T52 175 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 GINS4Q9BRT9 223 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 ZNF471Q9BX82 626 aaPredicted RBP2.08□□□□□ -2.08
LRRC28-212ENST00000558911 KIF25-AS1Q9Y6Z4 181 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 CDC42BPAQ5VT25 1732 aa2.08□□□□□ -2.08
LRRC28-212ENST00000558911 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
LRRC28-212ENST00000558911 PCM1Q15154 2024 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 TRAV13-1A0A0B4J241 112 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 TRBV7-6A0A0J9YX20 115 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 FAM92AA1XBS5 289 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 C9orf170A2RU37 121 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 A8MU10 97 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 C17orf98A8MV24 154 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 NDUFB3O43676 98 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 CISD3P0C7P0 127 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 SMIM6P0DI80 62 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 LINC00694P0DN24 101 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 HBBP68871 147 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 C2orf83Q53S99 150 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 TMEM14EPQ6UXP3 125 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 SOSTDC1Q6X4U4 206 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 MSRB3Q8IXL7 192 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 PDZD9Q8IXQ8 264 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 RPRMLQ8N4K4 120 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 APCDD1LQ8NCL9 501 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 C1orf64Q8NEQ6 169 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 OR4E2Q8NGC2 313 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 TMEM106AQ96A25 262 aa2.07□□□□□ -2.08
LRRC28-212ENST00000558911 YPEL2Q96QA6 119 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms