RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
TPM1-215ENST00000558868 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
TPM1-215ENST00000558868 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
TPM1-215ENST00000558868 FOXA3P55318 350 aaPredicted RBP10.37□□□□□ -0.75
TPM1-215ENST00000558868 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
TPM1-215ENST00000558868 BORCS7Q96B45 105 aa10.37□□□□□ -0.75
TPM1-215ENST00000558868 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
TPM1-215ENST00000558868 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
TPM1-215ENST00000558868 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 S100A8P05109 93 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 TFPI2P48307 235 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 FABP9Q0Z7S8 132 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 EBLN2Q6P2I7 272 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 ADAMTSL5Q6ZMM2 481 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 FRZBQ92765 325 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
TPM1-215ENST00000558868 A0A1B0GW15 77 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 SNURFLB1AK76 121 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 PHOX2AO14813 284 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BKO60814 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BJP06899 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 ZNF688P0C7X2 276 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BOP23527 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BBP33778 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BDP58876 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BCP62807 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST2H2BEQ16778 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.35□□□□□ -0.75
TPM1-215ENST00000558868 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
TPM1-215ENST00000558868 GTSF1Q8WW33 167 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BHQ93079 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BNQ99877 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 HIST1H2BMQ99879 126 aa10.35□□□□□ -0.75
TPM1-215ENST00000558868 OR4C46A6NHA9 309 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 SPINK4O60575 86 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 ORM1P02763 201 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 CRISP2P16562 243 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
TPM1-215ENST00000558868 RAB4BP61018 213 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 HBBP68871 147 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 RIGQ13278 110 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
TPM1-215ENST00000558868 SELENOKQ9Y6D0 94 aa10.34□□□□□ -0.75
TPM1-215ENST00000558868 TRAV21A0A0B4J279 112 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 A0A0J9YX75 114 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 A0A1B0GUT8 65 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
TPM1-215ENST00000558868 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
TPM1-215ENST00000558868 LEPP41159 167 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 NDUFA6P56556 154 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 PRIMA1Q86XR5 153 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
TPM1-215ENST00000558868 SPAG8Q99932 426 aaPredicted RBP10.33□□□□□ -0.76
TPM1-215ENST00000558868 A0A1B0GXF2 115 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 GPX1P07203 203 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 GZMBP10144 247 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 TSPOP30536 169 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
TPM1-215ENST00000558868 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 TMEM61Q8N0U2 210 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
TPM1-215ENST00000558868 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 F6UB75 175 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 APCSP02743 223 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
TPM1-215ENST00000558868 FER1L6-AS1Q8NA97 138 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 OR2K2Q8NGT1 345 aa10.31□□□□□ -0.76
TPM1-215ENST00000558868 CUBNO60494 3623 aa10.3□□□□□ -0.76
TPM1-215ENST00000558868 F2Z2F3 143 aa10.3□□□□□ -0.76
TPM1-215ENST00000558868 UBE2CO00762 179 aa10.3□□□□□ -0.76
TPM1-215ENST00000558868 CAMPP49913 170 aa10.3□□□□□ -0.76
TPM1-215ENST00000558868 CD300EQ496F6 205 aaPredicted RBP10.3□□□□□ -0.76
TPM1-215ENST00000558868 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
TPM1-215ENST00000558868 HIST2H2BDQ6DRA6 164 aa10.3□□□□□ -0.76
TPM1-215ENST00000558868 IGLC6P0CF74 106 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 HOXA5P20719 270 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 CTRLP40313 264 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 DEFB1P60022 68 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 TPPP3Q9BW30 176 aa10.29□□□□□ -0.76
TPM1-215ENST00000558868 KLLNB2CW77 178 aa10.28□□□□□ -0.76
TPM1-215ENST00000558868 PF4P02776 101 aa10.28□□□□□ -0.76
TPM1-215ENST00000558868 FRMD6-AS1P0C7T7 363 aa10.28□□□□□ -0.76
TPM1-215ENST00000558868 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
TPM1-215ENST00000558868 DEFB131AP59861 70 aa10.28□□□□□ -0.76
TPM1-215ENST00000558868 KRTAP10-3P60369 221 aa10.28□□□□□ -0.76
TPM1-215ENST00000558868 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
TPM1-215ENST00000558868 GATD1Q8NB37 220 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms