RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 PXMP4Q9Y6I8 212 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 LOC100131303A0A0U1RQF7 123 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 DUXBA0A1W2PPF3 345 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 LECT2O14960 151 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 CCNKO75909 580 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV3-33P01772 117 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 ORM1P02763 201 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 AKAIN1P0CW23 69 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGLC2P0DOY2 106 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV3-30-3P0DP02 117 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 ANXA3P12429 323 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 RNASE4P34096 147 aaKnown RBP3.56□□□□□ -1.84
LRRC28-208ENST00000558771 VBP1P61758 197 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 SELENOTP62341 195 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 SRPXP78539 464 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 SSBP1Q04837 148 aaKnown RBP3.56□□□□□ -1.84
LRRC28-208ENST00000558771 SLC38A11Q08AI6 406 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 LINC00305Q7Z4B0 112 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 CLVS1Q8IUQ0 354 aaPredicted RBP3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IQCF2Q8IXL9 164 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 C15orf40Q8WUR7 153 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 FAM19A4Q96LR4 140 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 PRRT1Q99946 306 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 TXNDC17Q9BRA2 123 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 DNAJC4Q9NNZ3 241 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 RNF24Q9Y225 148 aa3.56□□□□□ -1.84
LRRC28-208ENST00000558771 STRAPQ9Y3F4 350 aaKnown RBP3.56□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV1OR15-1A0A075B7D0 117 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 C9JCJ5 164 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 H3BQ15 152 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 M0R3E3 92 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 IGLV2-8P01709 118 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 GPX1P07203 203 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 OR4E1P0C645 316 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 SLC25A6P12236 298 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 TNFSF8P32971 234 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 ASIPP42127 132 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 PPT1P50897 306 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 RPL37AP61513 92 aaKnown RBP3.55□□□□□ -1.84
LRRC28-208ENST00000558771 RRAS2P62070 204 aaPredicted RBP3.55□□□□□ -1.84
LRRC28-208ENST00000558771 ASAH1Q13510 395 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 OPCMLQ14982 345 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 OR10J3Q5JRS4 329 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 PRR9Q5T870 116 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 OR10P1Q8NGE3 313 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 OR10G4Q8NGN3 311 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 SMIM4Q8WVI0 70 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 TMEM37Q8WXS4 190 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 SCGB3A2Q96PL1 93 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 CTDSP1Q9GZU7 261 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 SLC25A31Q9H0C2 315 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 AGPAT4-IT1Q9H0P7 198 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 Q9H521 79 aa3.55□□□□□ -1.84
LRRC28-208ENST00000558771 TRAV8-6A0A0B4J262 113 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 PIGBOS1A0A0B4J2F0 54 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 RBFOX3A6NFN3 312 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 K7EPK0 472 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 GOSR2O14653 212 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 COX7A2P2O60397 106 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 CRISP2P16562 243 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 MRPS10P82664 201 aaKnown RBP3.54□□□□□ -1.84
LRRC28-208ENST00000558771 LAGE3Q14657 143 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 ZNF846Q147U1 533 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 ACOT6Q3I5F7 207 aaPredicted RBP3.54□□□□□ -1.84
LRRC28-208ENST00000558771 TDRG1Q3Y452 100 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 ZFAND2AQ8N6M9 145 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 NHLRC2Q8NBF2 726 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 BAALCQ8WXS3 180 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 AP3S1Q92572 193 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
LRRC28-208ENST00000558771 LINC00477Q96M19 166 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 FUNDC2Q9BWH2 189 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 RBM38Q9H0Z9 239 aaKnown RBP3.54□□□□□ -1.84
LRRC28-208ENST00000558771 MIXL1Q9H2W2 232 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 NPVFQ9HCQ7 196 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 PSENENQ9NZ42 101 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 SCP2D1Q9UJQ7 156 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 RABL2BQ9UNT1 228 aa3.54□□□□□ -1.84
LRRC28-208ENST00000558771 TRAV4A0A0B4J268 109 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 ANKRD20A5PA0PJZ0 165 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 PGPEP1LA6NFU8 196 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 FNDC10F2Z333 226 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 AGPAT2O15120 278 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 ZNF253O75346 499 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 IGLV2-11P01706 119 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 NMBP08949 121 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 HOXB5P09067 269 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 METTL15P1P0C7V9 234 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 POLR2GP62487 172 aaKnown RBP eCLIP3.53□□□□□ -1.84
LRRC28-208ENST00000558771 GUK1Q16774 197 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 TMEM128Q5BJH2 165 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 MUC21Q5SSG8 566 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 C10orf113Q5VZT2 155 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 ZNF546Q86UE3 836 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 RAB2BQ8WUD1 216 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 RASL10AQ92737 203 aa3.53□□□□□ -1.84
LRRC28-208ENST00000558771 URB1-AS1Q96HZ7 61 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms