RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 F11RQ9Y624 299 aaKnown RBP2.45□□□□□ -2.02
HERC1-203ENST00000558532 SELENOKQ9Y6D0 94 aa2.45□□□□□ -2.02
HERC1-203ENST00000558532 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
HERC1-203ENST00000558532 FREM1Q5H8C1 2179 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 IGKV1D-17A0A075B6S4 117 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 IGLV9-49A0A0B4J1Y8 123 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 IGHV4-61A0A0C4DH41 118 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 MYMXA0A1B0GTQ4 84 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 FAM240AA0A1B0GVK7 77 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 TMEM213A2RRL7 107 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 K7EM74 188 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 MRPS12O15235 138 aaKnown RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 CEACAM4O75871 244 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 NPYP01303 97 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 IGHV4-59P01825 116 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 IL4P05112 153 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SAA1P0DJI8 122 aaPredicted RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 COX6B1P14854 86 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SLC25A16P16260 332 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 PLNP26678 52 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 RPL13AP40429 203 aaKnown RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 CXCL12P48061 93 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 CRIP1P50238 77 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SUB1P53999 127 aaKnown RBP eCLIP2.44□□□□□ -2.02
HERC1-203ENST00000558532 WT1-ASQ06250 92 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 PDE6HQ13956 83 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 C3AR1Q16581 482 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 TBC1D28Q2M2D7 210 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 DEFB133Q30KQ1 61 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 TMEM78Q5T7P6 136 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 AMTNQ6UX39 209 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SIGLEC15Q6ZMC9 328 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 ZNF833PQ6ZTB9 187 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 LINC00305Q7Z4B0 112 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 YRDCQ86U90 279 aaKnown RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 CD177Q8N6Q3 437 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 MAPKAPK5-AS1Q8N8E1 139 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 C8orf31Q8N9H6 132 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 RFESDQ8TAC1 157 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 RASL10AQ92737 203 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 RNF185Q96GF1 192 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 PRAC1Q96KF2 57 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SGK494Q96LW2 274 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 CITED2Q99967 270 aaPredicted RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 SPXQ9BT56 116 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 SPANXDQ9BXN6 97 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 ARRDC1-AS1Q9H2J1 176 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 MAP1LC3AQ9H492 121 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 YAE1D1Q9NRH1 226 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 GNG12Q9UBI6 72 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 B4GALT7Q9UBV7 327 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 VPREB3Q9UKI3 123 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 RAI1Q7Z5J4 1906 aaPredicted RBP2.44□□□□□ -2.02
HERC1-203ENST00000558532 ASXL3Q9C0F0 2248 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 CABIN1Q9Y6J0 2220 aa2.44□□□□□ -2.02
HERC1-203ENST00000558532 AGRNO00468 2067 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 TRBV19A0A075B6N1 114 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 TRBV7-7A0A0K0K1E9 115 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 A0A1B0GX51 115 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 DEFB108AA8MXU0 73 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 F8VRH5 84 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 H3BRN7 92 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 CCDC179H3BU77 68 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 K7EMI3 77 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 LHBP01229 141 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 IGKV3-15P01624 115 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 P0DMU3 169 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 FAM231AP0DMU4 169 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 FAM231CP0DMU5 169 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 CCL5P13501 91 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 PRDX2P32119 198 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 ERHP84090 104 aaKnown RBP2.43□□□□□ -2.02
HERC1-203ENST00000558532 MZT1Q08AG7 82 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 ALKBH6Q3KRA9 238 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 ADAMTSL4-AS1Q5T5F5 129 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 ZNF826PQ6ZT77 177 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 IL17RELQ6ZVW7 336 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 Q71RC1 249 aaPredicted RBP2.43□□□□□ -2.02
HERC1-203ENST00000558532 MDP1Q86V88 176 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 PPP1R27Q86WC6 154 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 TUSC5Q8IXB3 177 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 AMN1Q8IY45 258 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 SMIM20Q8N5G0 67 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 LINC00311Q8N616 119 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 Q8N8P6 123 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 MAPK1IP1LQ8NDC0 245 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 OR10J6PQ8NGY7 276 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 KLF14Q8TD94 323 aaPredicted RBP2.43□□□□□ -2.02
HERC1-203ENST00000558532 SRSF12Q8WXF0 261 aaKnown RBP2.43□□□□□ -2.02
HERC1-203ENST00000558532 NRGNQ92686 78 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 DNAJC30Q96LL9 226 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 RASL11BQ9BPW5 248 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 DCTN5Q9BTE1 182 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 TTTY13Q9BZ97 58 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 RAB1BQ9H0U4 201 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 FBXL15Q9H469 300 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 SPANXCQ9NY87 97 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 RPUSD1Q9UJJ7 312 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms