RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 BAALC-AS2P0C853 105 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 UBE2E1P51965 193 aa11.15□□□□□ -0.62
SPG11-210ENST00000558319 WISP1O95388 367 aa11.15□□□□□ -0.63
SPG11-210ENST00000558319 M0R1W7 72 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 J3QQQ9 107 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
SPG11-210ENST00000558319 KMT2EQ8IZD2 1858 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 IGLV3-32A0A0A0MS00 114 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 WFDC9Q8NEX5 89 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
SPG11-210ENST00000558319 IGHG2P01859 326 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
SPG11-210ENST00000558319 CACNA1EQ15878 2313 aa11.14□□□□□ -0.63
SPG11-210ENST00000558319 MDS2Q8NDY4 140 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 F6UB75 175 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
SPG11-210ENST00000558319 MINOS1Q5TGZ0 78 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 DOPEY2Q9Y3R5 2298 aa11.13□□□□□ -0.63
SPG11-210ENST00000558319 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
SPG11-210ENST00000558319 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 FAM223BA6NKX1 122 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 FAM223AQ8IWN6 122 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 MYLKQ15746 1914 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 IGKV1-6A0A0C4DH72 117 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 TRAV13-2A0A0B4J235 113 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 F8VRH5 84 aa11.12□□□□□ -0.63
SPG11-210ENST00000558319 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
SPG11-210ENST00000558319 CHD3Q12873 2000 aaKnown RBP11.11□□□□□ -0.63
SPG11-210ENST00000558319 XCL1P47992 114 aa11.11□□□□□ -0.63
SPG11-210ENST00000558319 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
SPG11-210ENST00000558319 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
SPG11-210ENST00000558319 K7EN84 100 aa11.11□□□□□ -0.63
SPG11-210ENST00000558319 NDUFC2O95298 119 aa11.11□□□□□ -0.63
SPG11-210ENST00000558319 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
SPG11-210ENST00000558319 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
SPG11-210ENST00000558319 C10orf91Q5T1B1 145 aa11.11□□□□□ -0.63
SPG11-210ENST00000558319 CFHR4Q92496 578 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 A0A1B0GX51 115 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 DEFB4AO15263 64 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 PDE6HQ13956 83 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 DKK4Q9UBT3 224 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 CMC4P56277 68 aaPredicted RBP11.1□□□□□ -0.63
SPG11-210ENST00000558319 TRBV6-6A0A0A6YYG2 114 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 B3GALT5-AS1P59052 145 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 IGLV10-54A0A075B6I4 117 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 RHODO00212 210 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 CFC1P0CG37 223 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 FNDC10F2Z333 226 aa11.1□□□□□ -0.63
SPG11-210ENST00000558319 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 DYSFO75923 2080 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 UBE2BP63146 152 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 RNF5Q99942 180 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 IGHV1-69DA0A0B4J2H0 117 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 C22orf46C9J442 243 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 BRK1Q8WUW1 75 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 TMEM190Q8WZ59 177 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 TMEM14BQ9NUH8 114 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 RALGAPA2Q2PPJ7 1873 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 ZNF503-AS2A6NEH8 195 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 PRR25Q96S07 402 aa11.09□□□□□ -0.63
SPG11-210ENST00000558319 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 J3QKU1 62 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 SIVA1O15304 175 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 IGHV3-30P01768 117 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 IGHV3-33P01772 117 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 IGHV3-30-5P0DP03 117 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 WFDC2Q14508 124 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 WFDC11Q8NEX6 87 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
SPG11-210ENST00000558319 HEATR5AQ86XA9 2040 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
SPG11-210ENST00000558319 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
SPG11-210ENST00000558319 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 CHKB-CPT1BH3BT56 60 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 GTF3C1Q12789 2109 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
SPG11-210ENST00000558319 LINC00173Q6ZV60 143 aa11.07□□□□□ -0.64
SPG11-210ENST00000558319 PRSS47A8MTI9 375 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 GNRH2O43555 120 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
SPG11-210ENST00000558319 K7EM74 188 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms