RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 IGLV1-40P01703 118 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 IGHV4-31P0DP07 118 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
TPM1-210ENST00000558264 CCDC168Q8NDH2 2452 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 C2orf70A6NJV1 201 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 GATA3P23771 443 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 LOXL1Q08397 574 aaPredicted RBP8.04□□□□□ -1.12
TPM1-210ENST00000558264 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 Q6AWC8 147 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 WFDC3Q8IUB2 231 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 WFDC12Q8WWY7 111 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 TMEM190Q8WZ59 177 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
TPM1-210ENST00000558264 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
TPM1-210ENST00000558264 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
TPM1-210ENST00000558264 CFHR3Q02985 330 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 COX8CQ7Z4L0 72 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 Q96MF0 132 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 CR1P17927 2039 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
TPM1-210ENST00000558264 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 TFPI2P48307 235 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
TPM1-210ENST00000558264 PRSS3P2Q8NHM4 247 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 TP73-AS1Q9UF72 201 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
TPM1-210ENST00000558264 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 DEFB113Q30KQ7 82 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 FAM104BQ5XKR9 115 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 ARL6IP6Q8N6S5 226 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 RBAKDNA6NC62 111 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 HOXA3O43365 443 aaPredicted RBP8.02□□□□□ -1.13
TPM1-210ENST00000558264 CTRLP40313 264 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
TPM1-210ENST00000558264 PRELID3AQ96N28 172 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 SNHG12Q9BXW3 62 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.13
TPM1-210ENST00000558264 CHD6Q8TD26 2715 aa8.02□□□□□ -1.13
TPM1-210ENST00000558264 A0A0G2JLM5 398 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 FBLL1A6NHQ2 334 aaKnown RBP8.01□□□□□ -1.13
TPM1-210ENST00000558264 H3BUA1 57 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 PRSS57Q6UWY2 283 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 ZNF493Q6ZR52 646 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 OR10AG1Q8NH19 301 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
TPM1-210ENST00000558264 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 IGHV7-4-1A0A0J9YVY3 117 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 NPYP01303 97 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 GATA1P15976 413 aaPredicted RBP8.01□□□□□ -1.13
TPM1-210ENST00000558264 EVI2AP22794 236 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 PSMB8P28062 276 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 CKS2P33552 79 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 BATFQ16520 125 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 C20orf144Q9BQM9 153 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 DAZ1Q9NQZ3 744 aaKnown RBP8.01□□□□□ -1.13
TPM1-210ENST00000558264 AP5S1Q9NUS5 200 aa8.01□□□□□ -1.13
TPM1-210ENST00000558264 A0A1B0GW15 77 aa8□□□□□ -1.13
TPM1-210ENST00000558264 SOCS3O14543 225 aa8□□□□□ -1.13
TPM1-210ENST00000558264 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
TPM1-210ENST00000558264 LINC01559Q495D7 138 aa8□□□□□ -1.13
TPM1-210ENST00000558264 C9orf47Q6ZRZ4 202 aa8□□□□□ -1.13
TPM1-210ENST00000558264 GATD1Q8NB37 220 aa8□□□□□ -1.13
TPM1-210ENST00000558264 SIGLEC8Q9NYZ4 499 aa8□□□□□ -1.13
TPM1-210ENST00000558264 ORMDL3Q8N138 153 aa8□□□□□ -1.13
TPM1-210ENST00000558264 ATP6V0BQ99437 205 aa8□□□□□ -1.13
TPM1-210ENST00000558264 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
TPM1-210ENST00000558264 H3BVH4 76 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 OR10J6PQ8NGY7 276 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 VPREB3Q9UKI3 123 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 UFC1Q9Y3C8 167 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 MYO9AB2RTY4 2548 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 J3QLI3 93 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 MRPL53Q96EL3 112 aaKnown RBP7.99□□□□□ -1.13
TPM1-210ENST00000558264 RNF185Q96GF1 192 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 ITPR3Q14573 2671 aa7.99□□□□□ -1.13
TPM1-210ENST00000558264 CUBNO60494 3623 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 hDV102S1A0JD36 115 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 OR4C46A6NHA9 309 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 RNASE4P34096 147 aaKnown RBP7.98□□□□□ -1.13
TPM1-210ENST00000558264 C18orf65Q6ZTR6 163 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 SMPXQ9UHP9 88 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 OR5AL1P0C617 328 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 IGLL1P15814 213 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 RAB4AP20338 218 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 SYNJ2BPP57105 145 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 DEFB136Q30KP8 78 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 ZFAND2AQ8N6M9 145 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 SORL1Q92673 2214 aa7.98□□□□□ -1.13
TPM1-210ENST00000558264 A0A096LNJ9 63 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 TCTAP57738 103 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms