RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 IGHV4-30-2A0A087WSY4 118 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 CBY3A6NI87 242 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 LINC01548A6NM66 108 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 D6R8Y8 96 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 H3BUX3 64 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 HBDP02042 147 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 TFPI2P48307 235 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 ZNF80P51504 273 aaPredicted RBP6.37□□□□□ -1.39
SPG11-209ENST00000558253 RNF151Q2KHN1 245 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 MRPL51Q4U2R6 128 aaKnown RBP6.37□□□□□ -1.39
SPG11-209ENST00000558253 TMEM219Q86XT9 240 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 GPHB5Q86YW7 130 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 OR1N2Q8NGR9 330 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 SIGLEC8Q9NYZ4 499 aa6.37□□□□□ -1.39
SPG11-209ENST00000558253 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 TRAV21A0A0B4J279 112 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 TMEM238C9JI98 176 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 K7EMI3 77 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 SNAI2O43623 268 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 CD5LO43866 347 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 PPP1R17O96001 155 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 IGLL1P15814 213 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 ID1P41134 155 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 LGALS9BQ3B8N2 356 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 LGALS9CQ6DKI2 356 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 AMN1Q8IY45 258 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 TEX29Q8N6K0 151 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 Q8TAT8 98 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 MRAP2Q96G30 205 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 PEF1Q9UBV8 284 aaKnown RBP6.36□□□□□ -1.39
SPG11-209ENST00000558253 UFC1Q9Y3C8 167 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 SPENQ96T58 3664 aaKnown RBP6.36□□□□□ -1.39
SPG11-209ENST00000558253 BSNQ9UPA5 3926 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 KALRNO60229 2985 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 ABCA4P78363 2273 aa6.36□□□□□ -1.39
SPG11-209ENST00000558253 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 IGHV3-35A0A0C4DH35 117 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 IGHV7-4-1A0A0J9YVY3 117 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 TMEM213A2RRL7 107 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 PRAC2D3DTV9 90 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 CSN3P07498 182 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 SMIM17P0DL12 118 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 IGHV4-38-2P0DP08 117 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 PF4V1P10720 104 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 COX6B1P14854 86 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
SPG11-209ENST00000558253 CFHR3Q02985 330 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 LOXL1Q08397 574 aaPredicted RBP6.35□□□□□ -1.39
SPG11-209ENST00000558253 ERCC8Q13216 396 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 SLC25A34Q6PIV7 304 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 BRD3OSQ6XYD6 125 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 IL17RELQ6ZVW7 336 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 WFDC3Q8IUB2 231 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 APRG1Q8IVJ8 170 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 DAZ1Q9NQZ3 744 aaKnown RBP6.35□□□□□ -1.39
SPG11-209ENST00000558253 SMPXQ9UHP9 88 aa6.35□□□□□ -1.39
SPG11-209ENST00000558253 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 SOCS3O14543 225 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 FCER1GP30273 86 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 SEC11AP67812 179 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 ZNF575Q86XF7 245 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 LRRC75A-AS1Q8N1F1 130 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 Q8N8P6 123 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 RNF185Q96GF1 192 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 ODF3Q96PU9 254 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 KRTAP9-9Q9BYP9 154 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.39
SPG11-209ENST00000558253 BEX4Q9NWD9 120 aaPredicted RBP6.34□□□□□ -1.39
SPG11-209ENST00000558253 IGHV3OR16-10A0A075B7F0 116 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3OR16-8A0A075B7F1 116 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 IGKV3D-20A0A0C4DH25 116 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 M0QZ24 198 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 SIVA1O15304 175 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 ATP5LO75964 103 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
SPG11-209ENST00000558253 MTURNQ8N3F0 131 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 SPTBN2O15020 2390 aa6.33□□□□□ -1.4
SPG11-209ENST00000558253 TPRP12270 2363 aaKnown RBP6.32□□□□□ -1.4
SPG11-209ENST00000558253 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 LOC389332A0A1B0GUA5 103 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 LGALS9O00182 355 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 PAX4O43316 350 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 ZNF207O43670 478 aaKnown RBP6.32□□□□□ -1.4
SPG11-209ENST00000558253 NPYP01303 97 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 ELANEP08246 267 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 COX8AP10176 69 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 PSMB8P28062 276 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 ASIPP42127 132 aa6.32□□□□□ -1.4
SPG11-209ENST00000558253 SRSF1Q07955 248 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPG11-209ENST00000558253 KIR3DS1Q14943 382 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms