RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF324O75467 553 aaPredicted RBP18.36■□□□□ 0.53
SMAD6-202ENST00000557916 AZU1P20160 251 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 BLOC1S1P78537 153 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 C11orf45Q8TAV5 145 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 TVP23CQ96ET8 276 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 NDFIP1Q9BT67 221 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 TREM1Q9NP99 234 aa18.36■□□□□ 0.53
SMAD6-202ENST00000557916 TRAV34A0A0B4J273 112 aa18.35■□□□□ 0.53
SMAD6-202ENST00000557916 PRNTQ86SH4 94 aa18.35■□□□□ 0.53
SMAD6-202ENST00000557916 C11orf94C9JXX5 98 aa18.34■□□□□ 0.53
SMAD6-202ENST00000557916 PYGO2Q9BRQ0 406 aa18.34■□□□□ 0.53
SMAD6-202ENST00000557916 C3orf84H3BNL1 204 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 NANOS2P60321 138 aaKnown RBP18.32■□□□□ 0.52
SMAD6-202ENST00000557916 Q6ZQT7 251 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 CELA1Q9UNI1 258 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 CXorf65A6NEN9 183 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 IFNA1P01562 189 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 PMS2P11Q13670 270 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 Q6AWC8 147 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 C16orf74Q96GX8 76 aa18.32■□□□□ 0.52
SMAD6-202ENST00000557916 SAPCD1Q5SSQ6 148 aa18.31■□□□□ 0.52
SMAD6-202ENST00000557916 ZFAND6Q6FIF0 208 aa18.31■□□□□ 0.52
SMAD6-202ENST00000557916 ZNF493Q6ZR52 646 aa18.31■□□□□ 0.52
SMAD6-202ENST00000557916 C8orf49Q96NF6 230 aa18.31■□□□□ 0.52
SMAD6-202ENST00000557916 RGS13O14921 159 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 SPART-AS1P0CW21 52 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 AKR1C3P42330 323 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 UBE2G1P62253 170 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 TMEM263Q8WUH6 116 aaKnown RBP18.3■□□□□ 0.52
SMAD6-202ENST00000557916 FMC1Q96HJ9 113 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 TXNDC17Q9BRA2 123 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 LINC00467Q9BRT7 94 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 KLF12Q9Y4X4 402 aa18.3■□□□□ 0.52
SMAD6-202ENST00000557916 SCO2A0A1W2PP80 73 aa18.29■□□□□ 0.52
SMAD6-202ENST00000557916 FAM222AQ5U5X8 452 aa18.29■□□□□ 0.52
SMAD6-202ENST00000557916 Q86TA4 180 aa18.29■□□□□ 0.52
SMAD6-202ENST00000557916 EIF4E3Q8N5X7 224 aaKnown RBP18.29■□□□□ 0.52
SMAD6-202ENST00000557916 RNASE8Q8TDE3 154 aaKnown RBP18.29■□□□□ 0.52
SMAD6-202ENST00000557916 DKK2Q9UBU2 259 aa18.29■□□□□ 0.52
SMAD6-202ENST00000557916 IGHV1OR15-1A0A075B7D0 117 aa18.28■□□□□ 0.52
SMAD6-202ENST00000557916 TEX261Q6UWH6 196 aa18.28■□□□□ 0.52
SMAD6-202ENST00000557916 PLAC8L1A1L4L8 177 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 CBY3A6NI87 242 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 BCL2P10415 239 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 TMEM183BQ1AE95 376 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 SMUG1Q53HV7 270 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 C2CD4CQ8TF44 421 aa18.27■□□□□ 0.52
SMAD6-202ENST00000557916 TRAV21A0A0B4J279 112 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 TEX48A0A1B0GUV7 120 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 GCGP01275 180 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 MEF2BQ02080 365 aaPredicted RBP18.26■□□□□ 0.51
SMAD6-202ENST00000557916 ANXA2RQ3ZCQ2 193 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 MUC21Q5SSG8 566 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 CASC10Q5T4H9 136 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 LYPD6BQ8NI32 183 aa18.26■□□□□ 0.51
SMAD6-202ENST00000557916 TRBV6-1A0A0K0K1D8 114 aa18.25■□□□□ 0.51
SMAD6-202ENST00000557916 S100A9P06702 114 aaKnown RBP18.25■□□□□ 0.51
SMAD6-202ENST00000557916 C12orf74Q32Q52 190 aa18.25■□□□□ 0.51
SMAD6-202ENST00000557916 ZNF767PQ75MW2 155 aa18.25■□□□□ 0.51
SMAD6-202ENST00000557916 ZNF680Q8NEM1 530 aa18.25■□□□□ 0.51
SMAD6-202ENST00000557916 ZFP30Q9Y2G7 519 aa18.25■□□□□ 0.51
SMAD6-202ENST00000557916 TAGLN2P37802 199 aaKnown RBP18.24■□□□□ 0.51
SMAD6-202ENST00000557916 ZNF80P51504 273 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-202ENST00000557916 FAM159AQ6UWV7 190 aa18.24■□□□□ 0.51
SMAD6-202ENST00000557916 VAX2Q9UIW0 290 aa18.24■□□□□ 0.51
SMAD6-202ENST00000557916 TIMM8BQ9Y5J9 83 aaPredicted RBP18.24■□□□□ 0.51
SMAD6-202ENST00000557916 LYRM9A8MSI8 78 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 NAGKQ9UJ70 344 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 TP53TG3Q9ULZ0 132 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 CSMD3Q7Z407 3707 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 SNURFLB1AK76 121 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 LTAP01374 205 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 Q6ZTC4 211 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 PHLDA1Q8WV24 401 aaPredicted RBP18.23■□□□□ 0.51
SMAD6-202ENST00000557916 C11orf52Q96A22 123 aa18.23■□□□□ 0.51
SMAD6-202ENST00000557916 NOP10Q9NPE3 64 aaKnown RBP18.23■□□□□ 0.51
SMAD6-202ENST00000557916 PDE6DO43924 150 aa18.22■□□□□ 0.51
SMAD6-202ENST00000557916 PFN1P07737 140 aaKnown RBP18.22■□□□□ 0.51
SMAD6-202ENST00000557916 STARD9Q9P2P6 4700 aa18.21■□□□□ 0.51
SMAD6-202ENST00000557916 C11orf72Q8NBR9 251 aa18.21■□□□□ 0.51
SMAD6-202ENST00000557916 GSN-AS1Q9NRJ2 163 aa18.21■□□□□ 0.51
SMAD6-202ENST00000557916 DAD1P61803 113 aa18.2■□□□□ 0.5
SMAD6-202ENST00000557916 TDRG1Q3Y452 100 aa18.2■□□□□ 0.5
SMAD6-202ENST00000557916 COX8CQ7Z4L0 72 aa18.2■□□□□ 0.5
SMAD6-202ENST00000557916 ZC2HC1AQ96GY0 325 aa18.2■□□□□ 0.5
SMAD6-202ENST00000557916 NUPR2A6NF83 97 aa18.19■□□□□ 0.5
SMAD6-202ENST00000557916 RBFOX3A6NFN3 312 aa18.19■□□□□ 0.5
SMAD6-202ENST00000557916 RPL35P42766 123 aaKnown RBP18.19■□□□□ 0.5
SMAD6-202ENST00000557916 IBA57Q5T440 356 aaKnown RBP18.19■□□□□ 0.5
SMAD6-202ENST00000557916 CEMP1Q6PRD7 247 aaPredicted RBP18.19■□□□□ 0.5
SMAD6-202ENST00000557916 TMEM183AQ8IXX5 376 aa18.19■□□□□ 0.5
SMAD6-202ENST00000557916 PCNPQ8WW12 178 aaKnown RBP18.19■□□□□ 0.5
SMAD6-202ENST00000557916 DEFB130BP0DP73 79 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 DEFB130AP0DP74 79 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 BAGE2Q86Y30 109 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 KCNS1Q96KK3 526 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 DERL1Q9BUN8 251 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 MED9Q9NWA0 146 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 C11orf21Q9P2W6 132 aa18.18■□□□□ 0.5
SMAD6-202ENST00000557916 TRGV11A0A075B6L2 103 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms