RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RYR1P21817 5038 aa10.1□□□□□ -0.79
SHMT2-235ENST00000557740 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 SSNA1O43805 119 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 IFNA5P01569 189 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 BTF3P20290 206 aaKnown RBP10.09□□□□□ -0.79
SHMT2-235ENST00000557740 H2BFSP57053 126 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 RANP62826 216 aaKnown RBP10.09□□□□□ -0.79
SHMT2-235ENST00000557740 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
SHMT2-235ENST00000557740 TAS2R45P59539 299 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 SLAQ13239 276 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 Q6ZQT7 251 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 SCGB1C1Q8TD33 95 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 PRO0255Q9UI72 69 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 HSPB11Q9Y547 144 aa10.08□□□□□ -0.8
SHMT2-235ENST00000557740 SIVA1O15304 175 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 MPC2O95563 127 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 DEFA1P59665 94 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 DEFA3P59666 94 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 IFITM3Q01628 133 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 ZNF266Q14584 549 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 SMIM3Q9BZL3 60 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
SHMT2-235ENST00000557740 NXPH4O95158 308 aa10.06□□□□□ -0.8
SHMT2-235ENST00000557740 RPL12P30050 165 aaKnown RBP10.06□□□□□ -0.8
SHMT2-235ENST00000557740 LINC00315P59091 139 aa10.06□□□□□ -0.8
SHMT2-235ENST00000557740 MAPKAPK5-AS1Q8N8E1 139 aa10.06□□□□□ -0.8
SHMT2-235ENST00000557740 HYLS1Q96M11 299 aa10.06□□□□□ -0.8
SHMT2-235ENST00000557740 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
SHMT2-235ENST00000557740 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 TRGV4A0A0C4DH28 118 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 CRYBA4P53673 196 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
SHMT2-235ENST00000557740 FAM74A1Q5RGS3 127 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 Q6AWC8 147 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 CMTM2Q8TAZ6 248 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 MBD2Q9UBB5 411 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 RPH3ALQ9UNE2 315 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 LENEPQ9Y5L5 61 aa10.05□□□□□ -0.8
SHMT2-235ENST00000557740 ABCA13Q86UQ4 5058 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 DIRC3C9JPN6 131 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 FHL2Q14192 279 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 TMEM183BQ1AE95 376 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 PCNPQ8WW12 178 aaKnown RBP10.04□□□□□ -0.8
SHMT2-235ENST00000557740 SPXQ9BT56 116 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 OTORQ9NRC9 128 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
SHMT2-235ENST00000557740 SRIP30626 198 aa10.03□□□□□ -0.8
SHMT2-235ENST00000557740 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
SHMT2-235ENST00000557740 ACOT6Q3I5F7 207 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-235ENST00000557740 NEGR1Q7Z3B1 354 aa10.03□□□□□ -0.8
SHMT2-235ENST00000557740 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
SHMT2-235ENST00000557740 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
SHMT2-235ENST00000557740 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
SHMT2-235ENST00000557740 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
SHMT2-235ENST00000557740 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
SHMT2-235ENST00000557740 PQLC2Q6ZP29 291 aa10.02□□□□□ -0.81
SHMT2-235ENST00000557740 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
SHMT2-235ENST00000557740 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
SHMT2-235ENST00000557740 PGPA6NDG6 321 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 A6NHS1 94 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 EREGO14944 169 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 RAB2AP61019 212 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 LYPD5Q6UWN5 251 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 Q6ZRN7 208 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-235ENST00000557740 OR10G4Q8NGN3 311 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 RASL10AQ92737 203 aa10.01□□□□□ -0.81
SHMT2-235ENST00000557740 F6UZH7 168 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 K7EQD1 137 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 ORM1P02763 201 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 GYPEP15421 78 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 ERVFC1-1P60608 527 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 TDRG1Q3Y452 100 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 IQCF2Q8IXL9 164 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 WFDC1Q9HC57 220 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 LY96Q9Y6Y9 160 aa10□□□□□ -0.81
SHMT2-235ENST00000557740 TRAV9-2A0A087WT02 112 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 TRAV21A0A0B4J279 112 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 C9JCJ5 164 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 NFE4Q86UQ8 179 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 ARL6IP6Q8N6S5 226 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 OR10G9Q8NGN4 311 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 OR10G7Q8NGN6 311 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 TXNDC17Q9BRA2 123 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 TREM1Q9NP99 234 aa9.99□□□□□ -0.81
SHMT2-235ENST00000557740 HSPG2P98160 4391 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 M0R2P5 195 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 GNG5P63218 68 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 Q8N1X5 172 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 OR4C5Q8NGB2 326 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 NDFIP1Q9BT67 221 aa9.98□□□□□ -0.81
SHMT2-235ENST00000557740 SDF2L1Q9HCN8 221 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms