RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
FOXN3-218ENST00000557718 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 TMEM218A2RU14 115 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 OR4C46A6NHA9 309 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 F6UZH7 168 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 DNASE2O00115 360 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-218ENST00000557718 PDE6DO43924 150 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 SFTA3P0C7M3 94 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 CT45A10P0DMU9 189 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 TAGLN2P37802 199 aaKnown RBP4.36□□□□□ -1.71
FOXN3-218ENST00000557718 RPL35P42766 123 aaKnown RBP4.36□□□□□ -1.71
FOXN3-218ENST00000557718 PEA15Q15121 130 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 TMEM183BQ1AE95 376 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 UQCC3Q6UW78 93 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 Q6ZQT7 251 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 C9orf47Q6ZRZ4 202 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 Q86TA4 180 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 ARL6IP6Q8N6S5 226 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 TMEM75Q8N9X5 138 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 OR8A1Q8NGG7 326 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 PRR25Q96S07 402 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 NKX6-2Q9C056 277 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-218ENST00000557718 SLC35B3Q9H1N7 401 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 SAV1Q9H4B6 383 aaPredicted RBP4.36□□□□□ -1.71
FOXN3-218ENST00000557718 SMDT1Q9H4I9 107 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 MEGF8Q7Z7M0 2845 aa4.36□□□□□ -1.71
FOXN3-218ENST00000557718 RBAKDNA6NC62 111 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 H3BMM0 161 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 K7EN84 100 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 LTAP01374 205 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 HLA-DRB4P13762 266 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 ID1P41134 155 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 AKR1C3P42330 323 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CRIP1P50238 77 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 ZNF80P51504 273 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CNN1P51911 297 aaKnown RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CEBPGP53567 150 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 PAFAH1B2P68402 229 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 FLI1Q01543 452 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 HIST1H1AQ02539 215 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 NDUFA5Q16718 116 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CENPWQ5EE01 88 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 KPRPQ5T749 579 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 LINC00322Q6ZN03 302 aaPredicted RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 FOXI2Q6ZQN5 318 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 TRPT1Q86TN4 253 aaKnown RBP4.35□□□□□ -1.71
FOXN3-218ENST00000557718 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 NHLRC2Q8NBF2 726 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CMTM2Q8TAZ6 248 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 FAM110AQ9BQ89 295 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 TCEAL7Q9BRU2 100 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 CLEC5AQ9NY25 188 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 ZNF492Q9P255 531 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 PSG8Q9UQ74 426 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 HLA-DRB4X5D2U9 266 aa4.35□□□□□ -1.71
FOXN3-218ENST00000557718 OR11H12B2RN74 326 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 C9JCJ5 164 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 F5H697 171 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 CRXO43186 299 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 RBMY1A1P0DJD3 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 RBMY1CP0DJD4 496 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 CRISP2P16562 243 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 TAS2R60P59551 318 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 SNRPD3P62318 126 aaKnown RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 RBMY1FQ15415 496 aaKnown RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 ZNF674Q2M3X9 581 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 COX8CQ7Z4L0 72 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 PRNTQ86SH4 94 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 OCC1Q8TAD7 63 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 ZC2HC1AQ96GY0 325 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 FMC1Q96HJ9 113 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 SMIM7Q9BQ49 75 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 PPP1R14DQ9NXH3 145 aa4.34□□□□□ -1.71
FOXN3-218ENST00000557718 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.71
FOXN3-218ENST00000557718 SERTM2A0A1B0GWG4 89 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 ZNF727A8MUV8 499 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 KLLNB2CW77 178 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 F8W036 122 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 TRIAP1O43715 76 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 PRB2P02812 416 aaPredicted RBP4.33□□□□□ -1.72
FOXN3-218ENST00000557718 CSN1S1P47710 185 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 ZNF138P52744 262 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 FXYD7P58549 80 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 OR5I1Q13606 314 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 ATRAIDQ6UW56 229 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 TMEM183AQ8IXX5 376 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 OR10J6PQ8NGY7 276 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms