RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GIPP09681 153 aaPredicted RBP4.11□□□□□ -1.75
VPS33B-207ENST00000557470 OR5AC1P0C628 307 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 OR10J4P0C629 311 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SULT1A3P0DMM9 295 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SULT1A4P0DMN0 295 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 HLA-DRB4P13762 266 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SNCAP37840 140 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 FXYD7P58549 80 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 DEFB1P60022 68 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SNRPD3P62318 126 aaKnown RBP4.11□□□□□ -1.75
VPS33B-207ENST00000557470 TIGITQ495A1 244 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 PYDC2Q56P42 97 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 GSG1LQ6UXU4 331 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF709Q8N972 641 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 OR4X1Q8NH49 305 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 ZNRF2Q8NHG8 242 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 TMEM230Q96A57 120 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 TMEM56-RWDD3S4R434 201 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 V9GYH0 126 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 HLA-DRB4X5D2U9 266 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 A0A087WZ39 114 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 F6UZH7 168 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 INS-IGF2F8WCM5 200 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 TSPAN13O95857 204 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 RNASE2P10153 161 aaKnown RBP4.1□□□□□ -1.75
VPS33B-207ENST00000557470 GATA1P15976 413 aaPredicted RBP4.1□□□□□ -1.75
VPS33B-207ENST00000557470 RAB5AP20339 215 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 OPRK1P41145 380 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 AKR1C3P42330 323 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 TAS2R46P59540 309 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 DAD1P61803 113 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 RAB31Q13636 194 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 JOSD1Q15040 202 aaPredicted RBP4.1□□□□□ -1.75
VPS33B-207ENST00000557470 CBLN2Q8IUK8 224 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 SLC35G3Q8N808 338 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 C15orf53Q8NAA6 179 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 OR5H2Q8NGV7 314 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 HIST1H2BAQ96A08 127 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 PBDC1Q9BVG4 233 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 ANAPC10Q9UM13 185 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 YTHDF2Q9Y5A9 579 aaKnown RBP4.1□□□□□ -1.75
VPS33B-207ENST00000557470 V9GYY9 64 aa4.1□□□□□ -1.75
VPS33B-207ENST00000557470 A0A0D9SG52 128 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 EPM2AB3EWF7 344 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 CORTO00230 105 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 PLA2G10O15496 165 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 IGKV1-5P01602 117 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 HBE1P02100 147 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 P0C879 139 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 IGLC1P0CG04 106 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 S100GP29377 79 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 HRH1P35367 487 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 SUB1P53999 127 aaKnown RBP eCLIP4.09□□□□□ -1.751e-6■■■■■ 30.8
VPS33B-207ENST00000557470 ZNF79Q15937 498 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 IQCJQ1A5X6 159 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 Q6ZVQ6 151 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 LINC01551Q86U37 167 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 C1orf158Q8N1D5 194 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 OR10D4PQ8NGN7 298 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 OR2T35Q8NGX2 323 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 LYPD6BQ8NI32 183 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 RPUSD4Q96CM3 377 aaKnown RBP4.09□□□□□ -1.75
VPS33B-207ENST00000557470 SFRP2Q96HF1 295 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 DIRAS2Q96HU8 199 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 SLC35B3Q9H1N7 401 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 PRO1933Q9H354 126 aa4.09□□□□□ -1.75
VPS33B-207ENST00000557470 LYRM2Q9NU23 88 aaPredicted RBP4.09□□□□□ -1.75
VPS33B-207ENST00000557470 TRAV30A0A087WSZ9 112 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 M0R036 132 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 BUB3O43684 328 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 NUDT3O95989 172 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 TOMM40O96008 361 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 IL4P05112 153 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 PET100P0DJ07 73 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 INAFM2P0DMQ5 153 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 ELK1P19419 428 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 OR10J1P30954 320 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 RND2P52198 227 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 AKR1C2P52895 323 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 TAS2R20P59543 309 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 UBE2MP61081 183 aaKnown RBP4.08□□□□□ -1.76
VPS33B-207ENST00000557470 YPEL3P61236 119 aaPredicted RBP4.08□□□□□ -1.76
VPS33B-207ENST00000557470 RIGQ13278 110 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 OR5I1Q13606 314 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 RHEBQ15382 184 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
VPS33B-207ENST00000557470 SAMD13Q5VXD3 122 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 SUMO4Q6EEV6 95 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 PRSS54Q6PEW0 395 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 OR11H7Q8NGC8 314 aa4.08□□□□□ -1.76
VPS33B-207ENST00000557470 OR4B1Q8NGF8 309 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms