RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 EMP1P54849 157 aa10.66□□□□□ -0.7
VIPAS39-210ENST00000557466 PRNTQ86SH4 94 aa10.66□□□□□ -0.7
VIPAS39-210ENST00000557466 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
VIPAS39-210ENST00000557466 TREM1Q9NP99 234 aa10.66□□□□□ -0.7
VIPAS39-210ENST00000557466 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 TMEM189A5PLL7 270 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 C11orf94C9JXX5 98 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 HTN1P15515 57 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 BLOC1S1P78537 153 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 Q86TA4 180 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.7
VIPAS39-210ENST00000557466 PLAC8L1A1L4L8 177 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 AKR1C3P42330 323 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 NANOS2P60321 138 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 Q6AWC8 147 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 ZFAND6Q6FIF0 208 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 C11orf45Q8TAV5 145 aa10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-210ENST00000557466 IFNA1P01562 189 aa10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 BCL2P10415 239 aa10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 C2CD4CQ8TF44 421 aa10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 C16orf74Q96GX8 76 aa10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 LINC00467Q9BRT7 94 aa10.63□□□□□ -0.71
VIPAS39-210ENST00000557466 CXorf65A6NEN9 183 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 RGS13O14921 159 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 UBE2G1P62253 170 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 EIF4E3Q8N5X7 224 aaKnown RBP10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 FMC1Q96HJ9 113 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 DKK2Q9UBU2 259 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
VIPAS39-210ENST00000557466 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 TRBV6-1A0A0K0K1D8 114 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 MEF2BQ02080 365 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 SAPCD1Q5SSQ6 148 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 ZNF493Q6ZR52 646 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 ZNF767PQ75MW2 155 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 C11orf52Q96A22 123 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
VIPAS39-210ENST00000557466 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 CBY3A6NI87 242 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 GCGP01275 180 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 C12orf74Q32Q52 190 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 TXNDC17Q9BRA2 123 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
VIPAS39-210ENST00000557466 TEX48A0A1B0GUV7 120 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 LTAP01374 205 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 Q6ZTC4 211 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 DERL1Q9BUN8 251 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 VAX2Q9UIW0 290 aa10.59□□□□□ -0.71
VIPAS39-210ENST00000557466 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 TAGLN2P37802 199 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 ZC2HC1AQ96GY0 325 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 C11orf21Q9P2W6 132 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 TIMM8BQ9Y5J9 83 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-210ENST00000557466 DNAH7Q8WXX0 4024 aa10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 SNURFLB1AK76 121 aa10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 PDE6DO43924 150 aa10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 S100A9P06702 114 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 PFN1P07737 140 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 RPL35P42766 123 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 IBA57Q5T440 356 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 NHLRC2Q8NBF2 726 aa10.57□□□□□ -0.72
VIPAS39-210ENST00000557466 NUPR2A6NF83 97 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 RBFOX3A6NFN3 312 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 TCL1AP56279 114 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 DAD1P61803 113 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 ZNF415Q09FC8 603 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 TOR2AQ5JU69 321 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 ZNF506Q5JVG8 444 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
VIPAS39-210ENST00000557466 TRGV11A0A075B6L2 103 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 TYMSP04818 313 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 CRIP1P50238 77 aa10.55□□□□□ -0.72
VIPAS39-210ENST00000557466 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms