RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 TMEM78Q5T7P6 136 aa17.3■□□□□ 0.36
RCCD1-208ENST00000557266 TCF21O43680 179 aa17.29■□□□□ 0.36
RCCD1-208ENST00000557266 PIMREGQ9BSJ6 248 aa17.29■□□□□ 0.36
RCCD1-208ENST00000557266 SPTAN1Q13813 2472 aaKnown RBP17.29■□□□□ 0.36
RCCD1-208ENST00000557266 NUDT3O95989 172 aa17.29■□□□□ 0.36
RCCD1-208ENST00000557266 GLMPQ8WWB7 406 aa17.29■□□□□ 0.36
RCCD1-208ENST00000557266 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
RCCD1-208ENST00000557266 CELSR1Q9NYQ6 3014 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 PPBPP02775 128 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 COX8AP10176 69 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 LGALS9BQ3B8N2 356 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 BVES-AS1Q5T3Y7 98 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 LGALS9CQ6DKI2 356 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 C9orf47Q6ZRZ4 202 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 MEGF9Q9H1U4 602 aa17.28■□□□□ 0.36
RCCD1-208ENST00000557266 TRBV12-3P01733 135 aa17.27■□□□□ 0.36
RCCD1-208ENST00000557266 CACNG7P62955 275 aa17.27■□□□□ 0.36
RCCD1-208ENST00000557266 HIF1ANQ9NWT6 349 aa17.27■□□□□ 0.36
RCCD1-208ENST00000557266 UBR5O95071 2799 aaPredicted RBP17.27■□□□□ 0.35
RCCD1-208ENST00000557266 IGHV4-38-2P0DP08 117 aa17.27■□□□□ 0.35
RCCD1-208ENST00000557266 ARL3P36405 182 aa17.27■□□□□ 0.35
RCCD1-208ENST00000557266 Q6ZQT7 251 aa17.27■□□□□ 0.35
RCCD1-208ENST00000557266 ZNF738Q8NE65 137 aa17.27■□□□□ 0.35
RCCD1-208ENST00000557266 MAP1LC3AQ9H492 121 aa17.27■□□□□ 0.35
RCCD1-208ENST00000557266 UNQ9165/PRO28630Q6UXU0 137 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 C10orf105Q8TEF2 133 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 IFI27L1Q96BM0 104 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 LINC01546A6NGU7 62 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 FOXE3Q13461 319 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 C16orf92Q96LL3 132 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 CCL19Q99731 98 aa17.26■□□□□ 0.35
RCCD1-208ENST00000557266 IGHV7-4-1A0A0J9YVY3 117 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 SMAD7O15105 426 aaKnown RBP17.25■□□□□ 0.35
RCCD1-208ENST00000557266 TNFRSF6BO95407 300 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 IGF1P05019 195 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 ANKRD39Q53RE8 183 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 C2orf91Q6ZV80 131 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 C20orf173Q96LM9 149 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 NPFFR1Q9GZQ6 430 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 PPP1R14DQ9NXH3 145 aa17.25■□□□□ 0.35
RCCD1-208ENST00000557266 GATA1P15976 413 aaPredicted RBP17.24■□□□□ 0.35
RCCD1-208ENST00000557266 EVI2AP22794 236 aa17.24■□□□□ 0.35
RCCD1-208ENST00000557266 LY6EQ16553 131 aa17.24■□□□□ 0.35
RCCD1-208ENST00000557266 C12orf54Q6X4T0 127 aa17.24■□□□□ 0.35
RCCD1-208ENST00000557266 DPF1Q92782 380 aa17.24■□□□□ 0.35
RCCD1-208ENST00000557266 CCL25O15444 150 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 C9orf139Q6ZV77 190 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 GPHB5Q86YW7 130 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 FGF6P10767 208 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 PRR9Q5T870 116 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 WFDC3Q8IUB2 231 aa17.23■□□□□ 0.35
RCCD1-208ENST00000557266 SNAI2O43623 268 aa17.22■□□□□ 0.35
RCCD1-208ENST00000557266 NXT2Q9NPJ8 142 aaKnown RBP17.21■□□□□ 0.35
RCCD1-208ENST00000557266 NDUFA4O00483 81 aa17.21■□□□□ 0.35
RCCD1-208ENST00000557266 IGHG2P01859 326 aa17.21■□□□□ 0.35
RCCD1-208ENST00000557266 IGHV4-30-2A0A087WSY4 118 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 A6NDX4 124 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 H3BUX3 64 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 TAX1BP3O14907 124 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 LEPP41159 167 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 UBE2V1Q13404 147 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 DEFB125Q8N687 156 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 FOSL1P15407 271 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 PTTG1IPP53801 180 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 SRSF1Q07955 248 aaKnown RBP eCLIP17.2■□□□□ 0.342e-7■■■■□ 26.1
RCCD1-208ENST00000557266 OR1N2Q8NGR9 330 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 C18orf15Q96N68 181 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 KLK15Q9H2R5 256 aa17.2■□□□□ 0.34
RCCD1-208ENST00000557266 FAM208BQ5VWN6 2430 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 CHD6Q8TD26 2715 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 NDUFS8O00217 210 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 SOCS3O14543 225 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 FCER1GP30273 86 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 CLEC2AQ6UVW9 174 aa17.19■□□□□ 0.34
RCCD1-208ENST00000557266 BRI3O95415 125 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 IGHV3-11P01762 117 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 SPOCK3Q9BQ16 436 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 ATP5J2P56134 94 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 USMG5Q96IX5 58 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 DKK2Q9UBU2 259 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 LENEPQ9Y5L5 61 aa17.18■□□□□ 0.34
RCCD1-208ENST00000557266 IGLV2-18A0A075B6J9 118 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 IGHV4-4A0A075B6R2 117 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 H3BUA1 57 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 TCTAP57738 103 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 BLCAPP62952 87 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 Q6ZS46 218 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 OR2K2Q8NGT1 345 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 UFC1Q9Y3C8 167 aa17.17■□□□□ 0.34
RCCD1-208ENST00000557266 ERASQ7Z444 233 aa17.16■□□□□ 0.34
RCCD1-208ENST00000557266 BOD1L2Q8IYS8 172 aa17.16■□□□□ 0.34
RCCD1-208ENST00000557266 ZFAND2AQ8N6M9 145 aa17.16■□□□□ 0.34
RCCD1-208ENST00000557266 Q8N8P6 123 aa17.16■□□□□ 0.34
RCCD1-208ENST00000557266 NRACQ8N912 160 aa17.16■□□□□ 0.34
RCCD1-208ENST00000557266 TRAV26-2A0A0B4J265 109 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 H3BVH4 76 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 MSMBP08118 114 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 DEFB1P60022 68 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 SPANXN1Q5VSR9 72 aa17.15■□□□□ 0.34
RCCD1-208ENST00000557266 SMIM15Q7Z3B0 74 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms