RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 SAPCD1Q5SSQ6 148 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 Q6YL49 198 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 KRTAP1-3Q8IUG1 177 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 OR4B1Q8NGF8 309 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 PSMG3-AS1Q96PY0 264 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 PAM16Q9Y3D7 125 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 HIVEP1P15822 2718 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 TRAV9-1A0A075B6T8 112 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 IGHV4OR15-8A0A075B7B6 117 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 A0A087WW49 117 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.51□□□□□ -1.69
SYNE2-225ENST00000557060 A8MWP6 167 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 J3QLI3 93 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 NDUFA4O00483 81 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 IGLV1-40P01703 118 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 PSMB8P28062 276 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 S100A7P31151 101 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 SLURP1P55000 103 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 S100A12P80511 92 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 KLHDC1Q8N7A1 406 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 UFC1Q9Y3C8 167 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 A0A1W2PS18 150 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 RNASE4P34096 147 aaKnown RBP4.51□□□□□ -1.69
SYNE2-225ENST00000557060 TCTAP57738 103 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 PSMG4Q5JS54 123 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 TMEM190Q8WZ59 177 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 NRN1Q9NPD7 142 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 ZNF492Q9P255 531 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 NBEAL2Q6ZNJ1 2754 aa4.51□□□□□ -1.69
SYNE2-225ENST00000557060 FABP5P3A8MUU1 101 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 M0R2Z0 102 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 COA6Q5JTJ3 125 aaKnown RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 PRR9Q5T870 116 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 C16orf54Q6UWD8 224 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 GPHB5Q86YW7 130 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 FER1L6-AS1Q8NA97 138 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 PMCHL2Q9BQD1 86 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 SLC50A1Q9BRV3 221 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 VWFP04275 2813 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 TRAV12-2A0A075B6T6 113 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 IGHV7-4-1A0A0J9YVY3 117 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 H3BVH4 76 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 M0R381 172 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 GAS8-AS1O95177 125 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 GPX1P07203 203 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 EVI2AP22794 236 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 HOXD3P31249 432 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 JOSD1Q15040 202 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 PRDM13Q9H4Q3 707 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 PPP1R14DQ9NXH3 145 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 TENM1Q9UKZ4 2725 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 A0A1B0GXF2 115 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 D6R8Y8 96 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 S100A4P26447 101 aaKnown RBP4.5□□□□□ -1.69
SYNE2-225ENST00000557060 BMI1P35226 326 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 RIGQ13278 110 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 C1orf194Q5T5A4 169 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 NIT1Q86X76 327 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 OR11H1Q8NG94 326 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 KCNS1Q96KK3 526 aa4.5□□□□□ -1.69
SYNE2-225ENST00000557060 F8P00451 2351 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 NACAE9PAV3 2078 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 LOC102724200A0A096LPH7 203 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-225ENST00000557060 TRAV26-2A0A0B4J265 109 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 TNP2Q05952 138 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 ZNF124Q15973 351 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 LINC00173Q6ZV60 143 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 KLHL30-AS1Q8NEE0 82 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 PRSS3P2Q8NHM4 247 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 DPF1Q92782 380 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 SMPXQ9UHP9 88 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 NSD1Q96L73 2696 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-225ENST00000557060 IGKV3D-20A0A0C4DH25 116 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 DNAJC9-AS1A6NH13 148 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-225ENST00000557060 CFHR3Q02985 330 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
SYNE2-225ENST00000557060 TSTD3H0UI37 97 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 CRIP2P52943 208 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-225ENST00000557060 Q0VG73 95 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 CT83Q5H943 113 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 PRSS57Q6UWY2 283 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 MS4A6AQ9H2W1 248 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 ESM1Q9NQ30 184 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 TRAV12-3A0A0B4J271 114 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 GNRH2O43555 120 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 PRM2P04554 102 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 CKS2P33552 79 aa4.48□□□□□ -1.69
SYNE2-225ENST00000557060 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms