RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 C15orf32Q32M92 178 aa8.79□□□□□ -1
SRP54-213ENST00000556994 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
SRP54-213ENST00000556994 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
SRP54-213ENST00000556994 SMIM17P0DL12 118 aa8.78□□□□□ -1
SRP54-213ENST00000556994 RPL24P83731 157 aaKnown RBP8.78□□□□□ -1
SRP54-213ENST00000556994 CDSNQ15517 529 aa8.78□□□□□ -1
SRP54-213ENST00000556994 LINC01559Q495D7 138 aa8.78□□□□□ -1
SRP54-213ENST00000556994 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
SRP54-213ENST00000556994 UFC1Q9Y3C8 167 aa8.78□□□□□ -1
SRP54-213ENST00000556994 SPTBN1Q01082 2364 aaKnown RBP8.78□□□□□ -1
SRP54-213ENST00000556994 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1
SRP54-213ENST00000556994 LINC01546A6NGU7 62 aa8.77□□□□□ -1
SRP54-213ENST00000556994 SPRY2O43597 315 aa8.77□□□□□ -1
SRP54-213ENST00000556994 BUB3O43684 328 aa8.77□□□□□ -1
SRP54-213ENST00000556994 DPM2O94777 84 aa8.77□□□□□ -1
SRP54-213ENST00000556994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.77□□□□□ -1
SRP54-213ENST00000556994 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1
SRP54-213ENST00000556994 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1
SRP54-213ENST00000556994 VKORC1Q9BQB6 163 aa8.77□□□□□ -1
SRP54-213ENST00000556994 MRPL35Q9NZE8 188 aaKnown RBP8.77□□□□□ -1
SRP54-213ENST00000556994 AGRNO00468 2067 aa8.77□□□□□ -1.01
SRP54-213ENST00000556994 CLEC19AQ6UXS0 136 aa8.77□□□□□ -1.01
SRP54-213ENST00000556994 Q8N6K4 173 aa8.77□□□□□ -1.01
SRP54-213ENST00000556994 Q8N8P6 123 aa8.77□□□□□ -1.01
SRP54-213ENST00000556994 TIMD4Q96H15 378 aa8.77□□□□□ -1.01
SRP54-213ENST00000556994 J3KRW8 73 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 M0R1W7 72 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 EFNA4P52798 201 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
SRP54-213ENST00000556994 PIFOQ8TCI5 191 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 MSRB2Q9Y3D2 182 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 MUC6Q6W4X9 2439 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 LINC01548A6NM66 108 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 ZFP36P26651 326 aaKnown RBP8.76□□□□□ -1.01
SRP54-213ENST00000556994 Q8N9W7 124 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
SRP54-213ENST00000556994 TEX48A0A1B0GUV7 120 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 CLPSL1A2RUU4 121 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 G3V318 75 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 SCGB2A1O75556 95 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 CCDC144NLQ6NUI1 221 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 CEND1Q8N111 149 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 MYOZ3Q8TDC0 251 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
SRP54-213ENST00000556994 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 IGHV7-4-1A0A0J9YVY3 117 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 TMEM238C9JI98 176 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 ATP5LO75964 103 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 LAGE3Q14657 143 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 NRACQ8N912 160 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 KLK15Q9H2R5 256 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 PTPRQQ9UMZ3 2332 aa8.75□□□□□ -1.01
SRP54-213ENST00000556994 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 TRAV8-2A0A0B4J237 113 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 SPANXN1Q5VSR9 72 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 GOSR1O95249 250 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 IGF1P05019 195 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
SRP54-213ENST00000556994 H3BVH4 76 aa8.73□□□□□ -1.01
SRP54-213ENST00000556994 CCL21O00585 134 aa8.73□□□□□ -1.01
SRP54-213ENST00000556994 EBI3Q14213 229 aa8.73□□□□□ -1.01
SRP54-213ENST00000556994 SMPXQ9UHP9 88 aa8.73□□□□□ -1.01
SRP54-213ENST00000556994 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 MTURNQ8N3F0 131 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 FAM110DQ8TAY7 271 aaPredicted RBP8.72□□□□□ -1.01
SRP54-213ENST00000556994 TM2D2Q9BX73 214 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 ATRXP46100 2492 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 RBAKDNA6NC62 111 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 WFDC2Q14508 124 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 PRR9Q5T870 116 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 SLC50A1Q9BRV3 221 aa8.72□□□□□ -1.01
SRP54-213ENST00000556994 A0A087WX48 190 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 IGLL5B9A064 214 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 H3BMG7 143 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 DEFB1P60022 68 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 TCF15Q12870 199 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 LCNL1Q6ZST4 164 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 HIST1H4GQ99525 98 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 LINC00527Q9UJ94 153 aa8.71□□□□□ -1.01
SRP54-213ENST00000556994 SRSF1Q07955 248 aaKnown RBP eCLIP8.71□□□□□ -1.02
SRP54-213ENST00000556994 M0R381 172 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 C12orf74Q32Q52 190 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 PSMG4Q5JS54 123 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 E9PLD3 99 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.7□□□□□ -1.02
SRP54-213ENST00000556994 NBL1P41271 181 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 RAB9AP51151 201 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms