RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 RPL7P18124 248 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 BCAP31P51572 246 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 AKR1C2P52895 323 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 PIGPP57054 158 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 RPL19P84098 196 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 ZNF90Q03938 601 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 IZUMO4Q1ZYL8 232 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 VWC2Q2TAL6 325 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 ZNF664Q8N3J9 261 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 OR51S1Q8NGJ8 323 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 ZNF431Q8TF32 576 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 FXYD6Q9H0Q3 95 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 MRPL16Q9NX20 251 aaKnown RBP3.6□□□□□ -1.83
ATXN3-245ENST00000556958 CACFD1Q9UGQ2 172 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 SCP2D1Q9UJQ7 156 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 KCNIP3Q9Y2W7 256 aa3.6□□□□□ -1.83
ATXN3-245ENST00000556958 A0A087WYN8 130 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 CENPXA8MT69 81 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 CTDSPLO15194 276 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SLC25A5P05141 298 aaKnown RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SFTA3P0C7M3 94 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 AP3S2P59780 193 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 DAZ4Q86SG3 579 aaKnown RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 S100A7AQ86SG5 101 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 OR10G4Q8NGN3 311 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 GTSF1Q8WW33 167 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 ZNF479Q96JC4 524 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SLC35E1Q96K37 410 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 PRRT1Q99946 306 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 TMEM147Q9BVK8 224 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 CTDSP1Q9GZU7 261 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 SDF2L1Q9HCN8 221 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 DAZ3Q9NR90 486 aaKnown RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-245ENST00000556958 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
ATXN3-245ENST00000556958 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 CEBPZOSA8MTT3 80 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 MPDU1O75352 247 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 OR10J4P0C629 311 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 GPX4P36969 197 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-245ENST00000556958 ELOBQ15370 118 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 OR10G9Q8NGN4 311 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 PRSS3P2Q8NHM4 247 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 Q8TAT8 98 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-245ENST00000556958 ODF3Q96PU9 254 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 TRGV9Q99603 122 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 PRADC1Q9BSG0 188 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-245ENST00000556958 PARD6GQ9BYG4 376 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-245ENST00000556958 GTSF1LQ9H1H1 148 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 OR51M1Q9H341 326 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 AAMDCQ9H7C9 122 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 RNF24Q9Y225 148 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 URGCP-MRPS24S4R325 110 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 U3KQ87 197 aa3.58□□□□□ -1.84
ATXN3-245ENST00000556958 IGKV1D-37A0A075B6S9 117 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 C7orf71A4D174 169 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 RHODO00212 210 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 IGKV1-5P01602 117 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 ORM2P19652 201 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 ATP5IP56385 69 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-245ENST00000556958 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 CACNG7P62955 275 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 Q0VG73 95 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-245ENST00000556958 BAK1Q16611 211 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-245ENST00000556958 LGI3Q8N145 548 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 OR4C5Q8NGB2 326 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 OR10P1Q8NGE3 313 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 RASL10AQ92737 203 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 LINC00479Q96M42 142 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-245ENST00000556958 PLAC8Q9NZF1 115 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms