RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ACTR3CQ9C0K3 210 aaPredicted RBP10.11□□□□□ -0.79
SLIRP-207ENST00000556831 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
SLIRP-207ENST00000556831 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 HMGB3O15347 200 aaKnown RBP10.1□□□□□ -0.79
SLIRP-207ENST00000556831 GPX1P07203 203 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 C12orf74Q32Q52 190 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 IQCF2Q8IXL9 164 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 LINC00476Q8WZB0 136 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 SH3BGRL3Q9H299 93 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
SLIRP-207ENST00000556831 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 C7orf71A4D174 169 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 EIF3GO75821 320 aaKnown RBP eCLIP10.09□□□□□ -0.793e-6■□□□□ 9.7
SLIRP-207ENST00000556831 SFTA3P0C7M3 94 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 ARL14EPLP0DKL9 152 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 HTN3P15516 51 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 RHEBQ15382 184 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 AKR1C8PQ5T2L2 129 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 TMEM263Q8WUH6 116 aaKnown RBP10.09□□□□□ -0.79
SLIRP-207ENST00000556831 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 OTORQ9NRC9 128 aa10.09□□□□□ -0.79
SLIRP-207ENST00000556831 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 PGPA6NDG6 321 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 CXorf1O96002 111 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 ZNF138P52744 262 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 PYGO2Q9BRQ0 406 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 TMEM167BQ9NRX6 74 aa10.08□□□□□ -0.8
SLIRP-207ENST00000556831 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-207ENST00000556831 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 K7EQM0 130 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 RNASE4P34096 147 aaKnown RBP10.07□□□□□ -0.8
SLIRP-207ENST00000556831 VGLL1Q99990 258 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 BIN3Q9NQY0 253 aa10.07□□□□□ -0.8
SLIRP-207ENST00000556831 TAGLN2P37802 199 aaKnown RBP10.06□□□□□ -0.8
SLIRP-207ENST00000556831 KIR3DS1Q14943 382 aa10.06□□□□□ -0.8
SLIRP-207ENST00000556831 Q8TAT8 98 aa10.06□□□□□ -0.8
SLIRP-207ENST00000556831 EIF5A2Q9GZV4 153 aaKnown RBP10.06□□□□□ -0.8
SLIRP-207ENST00000556831 ZNF492Q9P255 531 aa10.06□□□□□ -0.8
SLIRP-207ENST00000556831 KMT2AQ03164 3969 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 TRBV7-9A0A0J9YWB2 115 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 CTXND1A0A1B0GTU2 59 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 CBY3A6NI87 242 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 FAM74A7A6NL05 159 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 KLLNB2CW77 178 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 NDUFS6O75380 124 aaKnown RBP10.05□□□□□ -0.8
SLIRP-207ENST00000556831 PRM2P04554 102 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 CRISP2P16562 243 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 ADCYAP1P18509 176 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 AZU1P20160 251 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 GCHFRP30047 84 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 RAB5BP61020 215 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 RNF212Q495C1 297 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 FAM74A3Q4VXF1 159 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 GOLT1AQ6ZVE7 132 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 FAM210BQ96KR6 192 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
SLIRP-207ENST00000556831 SERTM2A0A1B0GWG4 89 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 IFNA1P01562 189 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 ARL6IP6Q8N6S5 226 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
SLIRP-207ENST00000556831 FAM19A4Q96LR4 140 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
SLIRP-207ENST00000556831 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
SLIRP-207ENST00000556831 TRAV1-1A0A0B4J248 108 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 MT-ND4LP03901 98 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 ATP5G1P05496 136 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 ATP5G3P48201 142 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 PPT1P50897 306 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 C5orf17Q8NAS9 161 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
SLIRP-207ENST00000556831 C1orf196B1AJZ1 125 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 APLNQ9ULZ1 77 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 FRAS1Q86XX4 4008 aa10.02□□□□□ -0.81
SLIRP-207ENST00000556831 UBR4Q5T4S7 5183 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 IGHV1OR15-1A0A075B7D0 117 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 B4DEV8 164 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 F5H768 121 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 M0R036 132 aa10.01□□□□□ -0.81
SLIRP-207ENST00000556831 GNG5P63218 68 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms