RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FAM222AQ5U5X8 452 aa7.36□□□□□ -1.23
SHMT2-224ENST00000556737 EXOC3-AS1Q8N2X6 119 aa7.36□□□□□ -1.23
SHMT2-224ENST00000556737 RPUSD4Q96CM3 377 aaKnown RBP7.36□□□□□ -1.23
SHMT2-224ENST00000556737 TXNDC17Q9BRA2 123 aa7.36□□□□□ -1.23
SHMT2-224ENST00000556737 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
SHMT2-224ENST00000556737 OTORQ9NRC9 128 aa7.36□□□□□ -1.23
SHMT2-224ENST00000556737 ARL2-SNX15V9GYD0 113 aa7.36□□□□□ -1.23
SHMT2-224ENST00000556737 TRAV12-2A0A075B6T6 113 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 DEFB131BA0A096LNP1 70 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 TEX48A0A1B0GUV7 120 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 PLAC8L1A1L4L8 177 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 GGTLC3B5MD39 225 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 SRP19P09132 144 aaKnown RBP7.35□□□□□ -1.23
SHMT2-224ENST00000556737 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 AKR1C3P42330 323 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 GNG5P63218 68 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 PDE6HQ13956 83 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 EIF4E3Q8N5X7 224 aaKnown RBP7.35□□□□□ -1.23
SHMT2-224ENST00000556737 CYB561D1Q8N8Q1 229 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 SUN5Q8TC36 379 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 SMDT1Q9H4I9 107 aa7.35□□□□□ -1.23
SHMT2-224ENST00000556737 DNAH17Q9UFH2 4485 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 C9JQL5 133 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 NDUFB4O95168 129 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 PRM2P04554 102 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 RRN3P1Q2M238 152 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 LYPD1Q8N2G4 141 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 C5orf17Q8NAS9 161 aa7.34□□□□□ -1.23
SHMT2-224ENST00000556737 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 ZNF727A8MUV8 499 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 ZNF705GA8MUZ8 300 aaPredicted RBP7.33□□□□□ -1.24
SHMT2-224ENST00000556737 KRBOX1C9JBD0 128 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM250H0YL14 139 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 K7EQM0 130 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 PEX7O00628 323 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 ZNF253O75346 499 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 TSPOP30536 169 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 UBE2G1P62253 170 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM208Q9BTX3 173 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 PPP1R14DQ9NXH3 145 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 EPDR1Q9UM22 224 aa7.33□□□□□ -1.24
SHMT2-224ENST00000556737 NPIPB6E9PJ23 425 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 M0R3E3 92 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 AZU1P20160 251 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 CDKN1BP46527 198 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 GOLT1AQ6ZVE7 132 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 HIST1H2BAQ96A08 127 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 MRPL53Q96EL3 112 aaKnown RBP7.32□□□□□ -1.24
SHMT2-224ENST00000556737 TCEAL7Q9BRU2 100 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 PARLQ9H300 379 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 PRELID1Q9Y255 219 aa7.32□□□□□ -1.24
SHMT2-224ENST00000556737 M0R036 132 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 APOC3P02656 99 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 TCRAP04437 139 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 S100A1P23297 94 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 GFI1BQ5VTD9 330 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 CCDC28AQ8IWP9 274 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM256Q8N2U0 113 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 OR10J6PQ8NGY7 276 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 RNASE8Q8TDE3 154 aaKnown RBP7.31□□□□□ -1.24
SHMT2-224ENST00000556737 SGK494Q96LW2 274 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 ODF3Q96PU9 254 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 ATG101Q9BSB4 218 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 NDUFAF3Q9BU61 184 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
SHMT2-224ENST00000556737 HERC2O95714 4834 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 IGKV2-40A0A087WW87 121 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-224ENST00000556737 TRAV34A0A0B4J273 112 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 LYRM9A8MSI8 78 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 IGKV2D-40P01614 121 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-224ENST00000556737 CT45A10P0DMU9 189 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
SHMT2-224ENST00000556737 GNG4P50150 75 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 TAS2R60P59551 318 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 C11orf52Q96A22 123 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 FAM19A4Q96LR4 140 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 C20orf144Q9BQM9 153 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 SEC11CQ9BY50 192 aa7.3□□□□□ -1.24
SHMT2-224ENST00000556737 DIRC3C9JPN6 131 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 J3KRW8 73 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 NDUFS6O75380 124 aaKnown RBP7.29□□□□□ -1.24
SHMT2-224ENST00000556737 S100A9P06702 114 aaKnown RBP7.29□□□□□ -1.24
SHMT2-224ENST00000556737 MGST1P10620 155 aaKnown RBP7.29□□□□□ -1.24
SHMT2-224ENST00000556737 HTN3P15516 51 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 ADCYAP1P18509 176 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 DAD1P61803 113 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 ADIRFQ15847 76 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM241Q24JQ0 296 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 FAM74A3Q4VXF1 159 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 CENPWQ5EE01 88 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 PRNTQ86SH4 94 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM263Q8WUH6 116 aaKnown RBP7.29□□□□□ -1.24
SHMT2-224ENST00000556737 C16orf74Q96GX8 76 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms