RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 LOC107986453A0A1B0GWG9 222 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 FABP5P3A8MUU1 101 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 KLF7O75840 302 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-210ENST00000556718 SNCGO76070 127 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 LEPROTL1O95214 131 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 IGLV3-27P01718 113 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 IFITM1P13164 125 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 CBLN1P23435 193 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 CSN1S1P47710 185 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 SPINT3P49223 89 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 QRFPP83859 136 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 RTL8BQ17RB0 113 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 LINC01590Q5TEZ4 76 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM215Q68D42 235 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 IGFL3Q6UXB1 125 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 SLC25A45Q8N413 288 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 OR8B12Q8NGG6 310 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 OR4A5Q8NH83 315 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 KLK6Q92876 244 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 CLDN23Q96B33 292 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 ARHGAP5-AS1Q96IT6 56 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM222Q9H0R3 208 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 LINC00574Q9H8X3 128 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 FAM60AQ9NP50 221 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 OSTCQ9NRP0 149 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 PSENENQ9NZ42 101 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 SHROOM3Q8TF72 1996 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 TRAV36DV7A0A075B6V5 113 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 IGHV3OR16-8A0A075B7F1 116 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 TRGV10A0A0A0MS01 117 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 A0A0D9SEW6 157 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 C17orf51A8MQB3 221 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 C9JCJ5 164 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 SYS1-DBNDD2H3BUS1 97 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 J3QLI3 93 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 SYNGR2O43760 224 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 OR7C1O76099 320 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-210ENST00000556718 APOMO95445 188 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 ORM1P02763 201 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 PEBP1P30086 187 aaKnown RBP2.51□□□□□ -2.01
PRPF39-210ENST00000556718 SRIP30626 198 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 ASIPP42127 132 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 ATP5L2Q7Z4Y8 100 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 SPATA12Q7Z6I5 190 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 PPDPFLQ8WWR9 84 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 APOBEC3DQ96AK3 386 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-210ENST00000556718 DNAJC30Q96LL9 226 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM147Q9BVK8 224 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 FBXL15Q9H469 300 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 SPANXB1Q9NS25 103 aaPredicted RBP2.51□□□□□ -2.01
PRPF39-210ENST00000556718 COL18A1P39060 1754 aa2.51□□□□□ -2.01
PRPF39-210ENST00000556718 RALGAPA2Q2PPJ7 1873 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-210ENST00000556718 ZSWIM8A7E2V4 1837 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 IGLL5B9A064 214 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 H3BMG7 143 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 J3KT08 172 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 ASAH2BP0C7U1 165 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 MGST1P10620 155 aaKnown RBP2.5□□□□□ -2.01
PRPF39-210ENST00000556718 EMP1P54849 157 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 FXYD4P59646 89 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 RPS28P62857 69 aaKnown RBP2.5□□□□□ -2.01
PRPF39-210ENST00000556718 SLC38A11Q08AI6 406 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 CATR1Q13166 79 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 MOBPQ13875 183 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 HES1Q14469 280 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 ZNF141Q15928 474 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 IGFBP7Q16270 282 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 MEIG1Q5JSS6 88 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 Q6Q795 121 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
PRPF39-210ENST00000556718 TCF23Q7RTU1 214 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 AMN1Q8IY45 258 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 OR51H1Q8NH63 302 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 RAB37Q96AX2 223 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 RMI2Q96E14 147 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 PBOV1Q9GZY1 135 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 C11orf1Q9H5F2 150 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 ENY2Q9NPA8 101 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 VPREB3Q9UKI3 123 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 SCN8AQ9UQD0 1980 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 VWA8A3KMH1 1905 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 LTBP4Q8N2S1 1624 aa2.5□□□□□ -2.01
PRPF39-210ENST00000556718 KIAA1671Q9BY89 1806 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 COL14A1Q05707 1796 aaKnown RBP2.49□□□□□ -2.01
PRPF39-210ENST00000556718 WDR90Q96KV7 1748 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 TICRRQ7Z2Z1 1910 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 TRBV20-1A0A075B6N2 111 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 SMIM27A0A1W2PRY6 76 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 SMIM9A6NGZ8 99 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 C2orf70A6NJV1 201 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 A8MUU9 505 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 FNDC10F2Z333 226 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 H3BSH0 61 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 SLC31A1O15431 190 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms