RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 MIR17HGQ75NE6 70 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 KIR2DL5AQ8N109 375 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 HSD17B11Q8NBQ5 300 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 KIR2DL5BQ8NHK3 375 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 MFFQ9GZY8 342 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 RPH3ALQ9UNE2 315 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 C5orf52A6NGY3 159 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 H3BMM0 161 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 H3BQ15 152 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 ARPC5O15511 151 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 DUSP14O95147 198 aaKnown RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 PYYP10082 97 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 PLP1P60201 277 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 ACOT6Q3I5F7 207 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 SPATA31B1PQ5VZV4 182 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 FOXI2Q6ZQN5 318 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 IQCF2Q8IXL9 164 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 OR10G7Q8NGN6 311 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 OR10J6PQ8NGY7 276 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 GATAD1Q8WUU5 269 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 RPUSD4Q96CM3 377 aaKnown RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 SPXQ9BT56 116 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 PAXXQ9BUH6 204 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 SLC35B3Q9H1N7 401 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 OR51M1Q9H341 326 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 SAV1Q9H4B6 383 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-243ENST00000556671 KCNIP2Q9NS61 270 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF586Q9NXT0 402 aa3.38□□□□□ -1.87
ATXN3-243ENST00000556671 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 TRAV12-2A0A075B6T6 113 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 A0A0J9YX75 114 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 C3orf84H3BNL1 204 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 M0R2Z0 102 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
ATXN3-243ENST00000556671 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 CNN1P51911 297 aaKnown RBP3.37□□□□□ -1.87
ATXN3-243ENST00000556671 RAB2AP61019 212 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 ERCC8Q13216 396 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-243ENST00000556671 SAMD13Q5VXD3 122 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 LCN15Q6UWW0 184 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 ARL6IP6Q8N6S5 226 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 OR2G3Q8NGZ4 309 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 LINC01587Q99440 93 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 SLC50A1Q9BRV3 221 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 FUT9Q9Y231 359 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
ATXN3-243ENST00000556671 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 A0A1W2PPQ1 181 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 PGPA6NDG6 321 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF705GA8MUZ8 300 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 SLC17A3O00476 420 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 SOCS3O14543 225 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 PRM2P04554 102 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 HTN3P15516 51 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 RNASE4P34096 147 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 CSN1S1P47710 185 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 TAS2R45P59539 299 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 RPL24P83731 157 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF266Q14584 549 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 GUK1Q16774 197 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 TMEM41BQ5BJD5 291 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 AKR1C8PQ5T2L2 129 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 RPL7L1Q6DKI1 246 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 RNASE8Q8TDE3 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-243ENST00000556671 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 PARD6GQ9BYG4 376 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-243ENST00000556671 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms