RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 KLK9Q9UKQ9 250 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 HIGD1AQ9Y241 93 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 MOB4Q9Y3A3 225 aa3.84□□□□□ -1.79
SRP54-211ENST00000556445 ARHGAP32A7KAX9 2087 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 IGLV11-55A0A075B6I3 123 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 TRBV24-1A0A075B6N3 115 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 IGKV1D-37A0A075B6S9 117 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 TRAV9-1A0A075B6T8 112 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 LINC01619G3V211 115 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 H3BUA1 57 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 K7EIM0 57 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 IGLC1P0CG04 106 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 CFC1BP0CG36 223 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 CFC1P0CG37 223 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 CT45A10P0DMU9 189 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 ORM2P19652 201 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 TSPOP30536 169 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 SRP14P37108 136 aaKnown RBP3.83□□□□□ -1.8
SRP54-211ENST00000556445 MYCNOSP40205 109 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 ATP5G3P48201 142 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 CRIP2P52943 208 aaPredicted RBP3.83□□□□□ -1.8
SRP54-211ENST00000556445 RPL23P62829 140 aaKnown RBP3.83□□□□□ -1.8
SRP54-211ENST00000556445 LOXL1Q08397 574 aaPredicted RBP3.83□□□□□ -1.8
SRP54-211ENST00000556445 CLEC12BQ2HXU8 276 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 TMEM97Q5BJF2 176 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 LINC00305Q7Z4B0 112 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 MRPL55Q7Z7F7 128 aaKnown RBP3.83□□□□□ -1.8
SRP54-211ENST00000556445 NFE4Q86UQ8 179 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 BPIFA4PQ86YQ2 179 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 C6orf223Q8N319 242 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 FAM24BQ8N5W8 94 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 Q8N9W7 124 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 SMIM12Q96EX1 92 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 FAM19A4Q96LR4 140 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 C21orf62Q9NYP8 219 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 PLXNB1O43157 2135 aa3.83□□□□□ -1.8
SRP54-211ENST00000556445 IGHV4-30-2A0A087WSY4 118 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 TRBV7-1A0A0A6YYK4 115 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 IGHV7-81A0A0B4J1V7 117 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 TRAV40A0A0B4J280 105 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 TEX48A0A1B0GUV7 120 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 PRB1P04280 392 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 CRYBA1P05813 215 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 GATA2P23769 480 aaPredicted RBP3.82□□□□□ -1.8
SRP54-211ENST00000556445 AKR1C3P42330 323 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 GNG4P50150 75 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 LYZP61626 148 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 RBX1P62877 108 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 ZNF90Q03938 601 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 PRB3Q04118 309 aaPredicted RBP3.82□□□□□ -1.8
SRP54-211ENST00000556445 ELOBQ15370 118 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 Q56UQ5 140 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 SPATA31B1PQ5VZV4 182 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 UNQ5815/PRO19632Q6UWF5 114 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 PATE2Q6UY27 113 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 TRPT1Q86TN4 253 aaKnown RBP3.82□□□□□ -1.8
SRP54-211ENST00000556445 LINC01551Q86U37 167 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 DYNAPQ8N1N2 210 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 C5orf17Q8NAS9 161 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 SFRP2Q96HF1 295 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 FAM210BQ96KR6 192 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 FAM167A-AS1Q96KT0 104 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 GPR82Q96P67 336 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 MRPL27Q9P0M9 148 aaKnown RBP3.82□□□□□ -1.8
SRP54-211ENST00000556445 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 YTHDF2Q9Y5A9 579 aaKnown RBP3.82□□□□□ -1.8
SRP54-211ENST00000556445 DOPEY1Q5JWR5 2465 aa3.82□□□□□ -1.8
SRP54-211ENST00000556445 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 FRYQ5TBA9 3013 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 IGHV4-4A0A075B6R2 117 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 TRAV8-4A0A0B4J246 113 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 WI2-2373I1.2A0A1W2PRP0 233 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 FAM223BA6NKX1 122 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 OR11H12B2RN74 326 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 PPP5D1E7EU14 171 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 H3BRN7 92 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 IGKV1-17P01599 117 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 P01737 135 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 SLC25A5P05141 298 aaKnown RBP3.81□□□□□ -1.8
SRP54-211ENST00000556445 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
SRP54-211ENST00000556445 OR10J4P0C629 311 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 APELAP0DMC3 54 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 NPPCP23582 126 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 CD24P25063 80 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 RPL35P42766 123 aaKnown RBP3.81□□□□□ -1.8
SRP54-211ENST00000556445 RPS10P46783 165 aaKnown RBP3.81□□□□□ -1.8
SRP54-211ENST00000556445 MEOX2P50222 304 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 UBE2G1P62253 170 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 PDE6HQ13956 83 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 DEFB113Q30KQ7 82 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 FAM223AQ8IWN6 122 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 C5orf56Q8N8D9 126 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 OR11H1Q8NG94 326 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 OR11H2Q8NH07 326 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 CMTM2Q8TAZ6 248 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 PYGO2Q9BRQ0 406 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms