RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PDE6HQ13956 83 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 HES1Q14469 280 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 PSG3Q16557 428 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 TDRG1Q3Y452 100 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 SAPCD1Q5SSQ6 148 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 LCN12Q6JVE5 192 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 EBLN2Q6P2I7 272 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 SMIM15Q7Z3B0 74 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 SHANK2-AS3Q9BTD1 123 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 MRPL36Q9P0J6 103 aaKnown RBP3.44□□□□□ -1.86
ATXN3-241ENST00000556374 PSG8Q9UQ74 426 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 KIAA2026Q5HYC2 2103 aa3.44□□□□□ -1.86
ATXN3-241ENST00000556374 DYSFO75923 2080 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 SONP18583 2426 aaKnown RBP3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GTF3C1Q12789 2109 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-241ENST00000556374 hDV102S1A0JD36 115 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GAGE12JA6NER3 117 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 C2orf70A6NJV1 201 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 SH2D7A6NKC9 451 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-241ENST00000556374 OOSP1A8MZH6 123 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 E7EUB6 86 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 I3L2K1 104 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 TIMM23O14925 209 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 FSTL3O95633 263 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 IGLV1-47P01700 117 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 CRYGBP07316 175 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 IGLL1P15814 213 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 UBE2V1Q13404 147 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 DIAPH2-AS1Q14236 149 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 TMEM97Q5BJF2 176 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 PSMG4Q5JS54 123 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GDF5OSQ5U4N7 250 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 UNQ5815/PRO19632Q6UWF5 114 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 Q6ZTC4 211 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GTF2H5Q6ZYL4 71 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 ORMDL3Q8N138 153 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 EXOC3-AS1Q8N2X6 119 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 MUC15Q8N387 334 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 ARL6IP6Q8N6S5 226 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 STPG4Q8N801 248 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GATD1Q8NB37 220 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GTSF1Q8WW33 167 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 GLMPQ8WWB7 406 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 NRGNQ92686 78 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 ARPC1AQ92747 370 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 MAP1LC3AQ9H492 121 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 SCRT2Q9NQ03 307 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 DPM3Q9P2X0 92 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 PEF1Q9UBV8 284 aaKnown RBP3.43□□□□□ -1.86
ATXN3-241ENST00000556374 RABAC1Q9UI14 185 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 VPS13CQ709C8 3753 aa3.43□□□□□ -1.86
ATXN3-241ENST00000556374 DSCAML1Q8TD84 2053 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 TRAV8-1A0A0A6YYK1 113 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 CBY3A6NI87 242 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 NPIPB5A8MRT5 1133 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 SHISA9B4DS77 424 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 E7EQL1 145 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 M0QZ24 198 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 M0R1W7 72 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 CRXO43186 299 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-241ENST00000556374 NDUFB8O95169 186 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 HBDP02042 147 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 TMEM11P17152 192 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 CNTFRP26992 372 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 FCGR2BP31994 310 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-241ENST00000556374 GPR183P32249 361 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 RAB9AP51151 201 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 SEC11AP67812 179 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 HSD52Q0P140 79 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 COTL1Q14019 142 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 FAM120AOSQ5T036 256 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 SIGLEC15Q6ZMC9 328 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 KIR3DL3Q8N743 410 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 C11orf44Q8N8P7 122 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 FER1L6-AS1Q8NA97 138 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 OR9G4Q8NGQ1 327 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 OR1N2Q8NGR9 330 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 ZC2HC1AQ96GY0 325 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 PRELID3AQ96N28 172 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 C21orf62Q9NYP8 219 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 MSRB1Q9NZV6 116 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 ZNF407Q9C0G0 2248 aa3.42□□□□□ -1.86
ATXN3-241ENST00000556374 LOC105371242A0A075B767 164 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 TMSB15BA0A087X1C1 80 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 WI2-2373I1.2A0A1W2PRP0 233 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 NCBP2LA6PVI3 153 aaKnown RBP3.41□□□□□ -1.86
ATXN3-241ENST00000556374 D6R8Y8 96 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 K7EIM0 57 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 K7ERU9 68 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 TNFRSF13BO14836 293 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-241ENST00000556374 CD5LO43866 347 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 SH2D1AO60880 128 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 NDUFA3O95167 84 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 PPBPP02775 128 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 COX8AP10176 69 aa3.41□□□□□ -1.86
ATXN3-241ENST00000556374 CKS2P33552 79 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms