RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 POLEQ07864 2286 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 KIAA2026Q5HYC2 2103 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 COL5A3P25940 1745 aaPredicted RBP2.12□□□□□ -2.07
VRK1-205ENST00000555402 ADGRB1O14514 1584 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 VPS8Q8N3P4 1428 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 C5orf67F2Z3F1 127 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 YPEL1O60688 119 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 S100A8P05109 93 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 PYYP10082 97 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 CKS2P33552 79 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 ETV6P41212 452 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 GNG4P50150 75 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 ZNF846Q147U1 533 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 MEIG1Q5JSS6 88 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 OR5AS1Q8N127 324 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 C10orf111Q8N326 155 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 PP6455Q8WZ26 134 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 ZNF625Q96I27 306 aaPredicted RBP2.12□□□□□ -2.07
VRK1-205ENST00000555402 PPP3R2Q96LZ3 170 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 NABP2Q9BQ15 211 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 BOKQ9UMX3 212 aaPredicted RBP2.12□□□□□ -2.07
VRK1-205ENST00000555402 LHFPL6Q9Y693 200 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 MYH13Q9UKX3 1938 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 KIDINS220Q9ULH0 1771 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 QRICH2Q9H0J4 1663 aa2.12□□□□□ -2.07
VRK1-205ENST00000555402 COL24A1Q17RW2 1714 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 DEFB113Q30KQ7 82 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 Q6ZUT4 128 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 ARPINQ7Z6K5 226 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 COA5Q86WW8 74 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 KCNRGQ8N5I3 272 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 COL11A1P12107 1806 aaPredicted RBP2.11□□□□□ -2.07
VRK1-205ENST00000555402 MGAMO43451 1857 aa2.11□□□□□ -2.07
VRK1-205ENST00000555402 ZFC3H1O60293 1989 aaKnown RBP2.1□□□□□ -2.07
VRK1-205ENST00000555402 A2ML1A8K2U0 1454 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 C3orf85A0A1B0GTC6 90 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 CCDC179H3BU77 68 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 EDF1O60869 148 aaKnown RBP2.1□□□□□ -2.07
VRK1-205ENST00000555402 DSCR4P56555 118 aaPredicted RBP2.1□□□□□ -2.07
VRK1-205ENST00000555402 PPP3R1P63098 170 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 SNRNP25Q9BV90 132 aaKnown RBP2.1□□□□□ -2.07
VRK1-205ENST00000555402 SAR1AQ9NR31 198 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 MPC1Q9Y5U8 109 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 DOCK10Q96BY6 2186 aa2.1□□□□□ -2.07
VRK1-205ENST00000555402 MYH9P35579 1960 aaKnown RBP2.1□□□□□ -2.07
VRK1-205ENST00000555402 PZPP20742 1482 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 TANC2Q9HCD6 1990 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 IGHV1-24A0A0C4DH33 117 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 A6NN06 94 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 CD2P06729 351 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 ASB16-AS1Q495Z4 193 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 CASC2Q6XLA1 102 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 FAM19A2Q8N3H0 131 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 C9orf163Q8N9P6 203 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 DPH3Q96FX2 82 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 RERGLQ9H628 205 aa2.09□□□□□ -2.07
VRK1-205ENST00000555402 MDC1Q14676 2089 aaKnown RBP2.09□□□□□ -2.07
VRK1-205ENST00000555402 BCORL1Q5H9F3 1711 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 CFTRP13569 1480 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 NRKQ7Z2Y5 1582 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 TRAV12-2A0A075B6T6 113 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 LOC107984156A0A0G2JMH3 177 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 C2orf70A6NJV1 201 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 ZNF736B4DX44 427 aaPredicted RBP2.08□□□□□ -2.08
VRK1-205ENST00000555402 E7EUB6 86 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 M0R2P5 195 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 ERC2-IT1O76042 136 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 TPPP2P59282 170 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 BTG2P78543 158 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 ELOBQ15370 118 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
VRK1-205ENST00000555402 SNX29P2Q8IUI4 249 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 ARL17AQ8IVW1 177 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 Q8N2B8 174 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 COPS9Q8WXC6 57 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 PSMF1Q92530 271 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 Q96M85 177 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 AKAP12Q02952 1782 aa2.08□□□□□ -2.08
VRK1-205ENST00000555402 ZFYVE16Q7Z3T8 1539 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 DISP1Q96F81 1524 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 A0A087WSZ3 146 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 TCRBV4S1A1TA0A5B7 111 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 HYPMO75409 117 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 MIC13Q5XKP0 118 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 C2orf82Q6UX34 121 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 CLECL1Q8IZS7 167 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 LINC00269Q8N2A0 174 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 SFT2D1Q8WV19 159 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 SMIM7Q9BQ49 75 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 ZFP30Q9Y2G7 519 aa2.07□□□□□ -2.08
VRK1-205ENST00000555402 NOP16Q9Y3C1 178 aaKnown RBP2.07□□□□□ -2.08
VRK1-205ENST00000555402 HELZP42694 1942 aaKnown RBP2.07□□□□□ -2.08
VRK1-205ENST00000555402 COL4A5P29400 1685 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 KIAA1549LQ6ZVL6 1849 aa2.06□□□□□ -2.08
VRK1-205ENST00000555402 IFITM5A6NNB3 132 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms