RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
VRK1-203ENST00000555067 TCTEX1D1Q8N7M0 179 aa2.57□□□□□ -2
VRK1-203ENST00000555067 C14orf144Q96I85 54 aa2.57□□□□□ -2
VRK1-203ENST00000555067 CIB3Q96Q77 187 aaPredicted RBP2.57□□□□□ -2
VRK1-203ENST00000555067 CHCHD2Q9Y6H1 151 aaPredicted RBP2.57□□□□□ -2
VRK1-203ENST00000555067 CORTO00230 105 aa2.56□□□□□ -2
VRK1-203ENST00000555067 IGKV1-17P01599 117 aa2.56□□□□□ -2
VRK1-203ENST00000555067 MEIG1Q5JSS6 88 aa2.56□□□□□ -2
VRK1-203ENST00000555067 ATOH7Q8N100 152 aa2.56□□□□□ -2
VRK1-203ENST00000555067 DPH3Q96FX2 82 aa2.56□□□□□ -2
VRK1-203ENST00000555067 Q96M85 177 aa2.56□□□□□ -2
VRK1-203ENST00000555067 SCN3BQ9NY72 215 aa2.56□□□□□ -2
VRK1-203ENST00000555067 DISP1Q96F81 1524 aa2.56□□□□□ -2
VRK1-203ENST00000555067 HELZP42694 1942 aaKnown RBP2.56□□□□□ -2
VRK1-203ENST00000555067 ATG2AQ2TAZ0 1938 aa2.56□□□□□ -2
VRK1-203ENST00000555067 MYH9P35579 1960 aaKnown RBP2.56□□□□□ -2
VRK1-203ENST00000555067 MUC4Q99102 2169 aa2.56□□□□□ -2
VRK1-203ENST00000555067 IGHV1-24A0A0C4DH33 117 aa2.55□□□□□ -2
VRK1-203ENST00000555067 ADGRB1O14514 1584 aa2.55□□□□□ -2
VRK1-203ENST00000555067 EDF1O60869 148 aaKnown RBP2.55□□□□□ -2
VRK1-203ENST00000555067 PITX3O75364 302 aa2.55□□□□□ -2
VRK1-203ENST00000555067 MRPS10P82664 201 aaKnown RBP2.55□□□□□ -2
VRK1-203ENST00000555067 ASB16-AS1Q495Z4 193 aa2.55□□□□□ -2
VRK1-203ENST00000555067 SCIMPQ6UWF3 145 aa2.55□□□□□ -2
VRK1-203ENST00000555067 CASC2Q6XLA1 102 aa2.55□□□□□ -2
VRK1-203ENST00000555067 ZCCHC23Q6ZST2 131 aa2.55□□□□□ -2
VRK1-203ENST00000555067 ZNF833PQ6ZTB9 187 aa2.55□□□□□ -2
VRK1-203ENST00000555067 Q6ZUT4 128 aa2.55□□□□□ -2
VRK1-203ENST00000555067 PDCD10Q9BUL8 212 aa2.55□□□□□ -2
VRK1-203ENST00000555067 TTTY12Q9BZ98 90 aa2.55□□□□□ -2
VRK1-203ENST00000555067 BRWD1Q9NSI6 2320 aa2.55□□□□□ -2
VRK1-203ENST00000555067 MPC1Q9Y5U8 109 aa2.55□□□□□ -2
VRK1-203ENST00000555067 PLXNA4Q9HCM2 1894 aa2.54□□□□□ -2
VRK1-203ENST00000555067 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.54□□□□□ -2
VRK1-203ENST00000555067 MRC2Q9UBG0 1479 aa2.54□□□□□ -2
VRK1-203ENST00000555067 NAIPQ13075 1403 aa2.54□□□□□ -2
VRK1-203ENST00000555067 CCNB3Q8WWL7 1395 aa2.54□□□□□ -2
VRK1-203ENST00000555067 CCDC179H3BU77 68 aa2.54□□□□□ -2
VRK1-203ENST00000555067 M0R2P5 195 aa2.54□□□□□ -2
VRK1-203ENST00000555067 YPEL1O60688 119 aa2.54□□□□□ -2
VRK1-203ENST00000555067 AKAIN1P0CW23 69 aa2.54□□□□□ -2
VRK1-203ENST00000555067 SMIM6P0DI80 62 aa2.54□□□□□ -2
VRK1-203ENST00000555067 CXCL8P10145 99 aa2.54□□□□□ -2
VRK1-203ENST00000555067 FGF7P21781 194 aa2.54□□□□□ -2
VRK1-203ENST00000555067 BRS3P32247 399 aa2.54□□□□□ -2
VRK1-203ENST00000555067 MIC13Q5XKP0 118 aa2.54□□□□□ -2
VRK1-203ENST00000555067 C2orf82Q6UX34 121 aa2.54□□□□□ -2
VRK1-203ENST00000555067 PP6455Q8WZ26 134 aa2.54□□□□□ -2
VRK1-203ENST00000555067 PSMG3Q9BT73 122 aaPredicted RBP2.54□□□□□ -2
VRK1-203ENST00000555067 SAR1AQ9NR31 198 aa2.54□□□□□ -2
VRK1-203ENST00000555067 TRAV14DV4A0A0A6YYC5 116 aa2.53□□□□□ -2
VRK1-203ENST00000555067 C1orf137Q5JT78 98 aa2.53□□□□□ -2
VRK1-203ENST00000555067 FOXI2Q6ZQN5 318 aa2.53□□□□□ -2
VRK1-203ENST00000555067 SNX29P2Q8IUI4 249 aa2.53□□□□□ -2
VRK1-203ENST00000555067 KCNRGQ8N5I3 272 aa2.53□□□□□ -2
VRK1-203ENST00000555067 TXNDC17Q9BRA2 123 aa2.53□□□□□ -2
VRK1-203ENST00000555067 SNRNP25Q9BV90 132 aaKnown RBP2.53□□□□□ -2
VRK1-203ENST00000555067 KIDINS220Q9ULH0 1771 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 C20orf202A1L168 122 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 ZNF736B4DX44 427 aaPredicted RBP2.52□□□□□ -2.01
VRK1-203ENST00000555067 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 KRTAP26-1Q6PEX3 210 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 SMIM7Q9BQ49 75 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 COA4Q9NYJ1 87 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 BOKQ9UMX3 212 aaPredicted RBP2.52□□□□□ -2.01
VRK1-203ENST00000555067 CUL7Q14999 1698 aa2.52□□□□□ -2.01
VRK1-203ENST00000555067 TRAV12-2A0A075B6T6 113 aa2.51□□□□□ -2.01
VRK1-203ENST00000555067 SNAPC5O75971 98 aa2.51□□□□□ -2.01
VRK1-203ENST00000555067 RBP2P50120 134 aa2.51□□□□□ -2.01
VRK1-203ENST00000555067 FP248Q71RG6 208 aaPredicted RBP2.51□□□□□ -2.01
VRK1-203ENST00000555067 GKN2Q86XP6 184 aa2.51□□□□□ -2.01
VRK1-203ENST00000555067 ATP6V0E2Q8NHE4 81 aa2.51□□□□□ -2.01
VRK1-203ENST00000555067 NOP16Q9Y3C1 178 aaKnown RBP2.51□□□□□ -2.01
VRK1-203ENST00000555067 FREM3P0C091 2139 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 HEATR1Q9H583 2144 aaKnown RBP2.5□□□□□ -2.01
VRK1-203ENST00000555067 IFITM5A6NNB3 132 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 HIST1H1DP16402 221 aaKnown RBP2.5□□□□□ -2.01
VRK1-203ENST00000555067 ATP11AUNQ6ZP68 121 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 LAMB4A4D0S4 1761 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 LAMB2P55268 1798 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 MED12LQ86YW9 2145 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 TRPM7Q96QT4 1865 aa2.5□□□□□ -2.01
VRK1-203ENST00000555067 RTTNQ86VV8 2226 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 BAZ2BQ9UIF8 2168 aaKnown RBP2.49□□□□□ -2.01
VRK1-203ENST00000555067 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
VRK1-203ENST00000555067 TRBV6-8A0A0A6YYG3 113 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 HYPMO75409 117 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 GNG4P50150 75 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 CNBPP62633 177 aaKnown RBP2.49□□□□□ -2.01
VRK1-203ENST00000555067 BTG2P78543 158 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 LINC01545Q5VT33 79 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 SEC11CQ9BY50 192 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 DOCK10Q96BY6 2186 aa2.49□□□□□ -2.01
VRK1-203ENST00000555067 CEP192Q8TEP8 1941 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 A2ML1A8K2U0 1454 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 MYOM2P54296 1465 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 KIAA1549LQ6ZVL6 1849 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 J3QLW9 94 aa2.48□□□□□ -2.01
VRK1-203ENST00000555067 ADCYAP1P18509 176 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms