RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 DERL1Q9BUN8 251 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 MLST8Q9BVC4 326 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
SYNE2-215ENST00000554997 SPRY2O43597 315 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 NHLRC4P0CG21 123 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-215ENST00000554997 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 GFI1BQ5VTD9 330 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 UQCC3Q6UW78 93 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 Q86TA4 180 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 C1orf158Q8N1D5 194 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 EIF4E3Q8N5X7 224 aaKnown RBP7.42□□□□□ -1.22
SYNE2-215ENST00000554997 RCHY1Q96PM5 261 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 TM2D3Q9BRN9 247 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 TGP01266 2768 aa7.42□□□□□ -1.22
SYNE2-215ENST00000554997 TRAV12-3A0A0B4J271 114 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 C7orf71A4D174 169 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 FABP5P3A8MUU1 101 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 J3KRW8 73 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 INSP01308 110 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 GNG4P50150 75 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 DEFB135Q30KP9 77 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 PRR9Q5T870 116 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 Q6AWC8 147 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 ZNF705AQ6ZN79 300 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-215ENST00000554997 TMEM256Q8N2U0 113 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 PARLQ9H300 379 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 GOLT1BQ9Y3E0 138 aa7.41□□□□□ -1.22
SYNE2-215ENST00000554997 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 TRAV21A0A0B4J279 112 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 SMIM9A6NGZ8 99 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 C9JCJ5 164 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 H7BYZ3 331 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 GCGP01275 180 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 PFN1P07737 140 aaKnown RBP7.4□□□□□ -1.22
SYNE2-215ENST00000554997 CRIP1P50238 77 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 ZNF80P51504 273 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-215ENST00000554997 CEBPGP53567 150 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 BTN1A1Q13410 526 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 ZNF674Q2M3X9 581 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 CENPWQ5EE01 88 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 LINC01587Q99440 93 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 NEU1Q99519 415 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 NIPSNAP3BQ9BS92 247 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 ZMAT4Q9H898 229 aa7.4□□□□□ -1.22
SYNE2-215ENST00000554997 AGRNO00468 2067 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 ZNF727A8MUV8 499 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
SYNE2-215ENST00000554997 RBMY1CP0DJD4 496 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 RBMY1FQ15415 496 aaKnown RBP7.39□□□□□ -1.23
SYNE2-215ENST00000554997 TMEM241Q24JQ0 296 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 Q6ZQT7 251 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 OR11H2Q8NH07 326 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 OCC1Q8TAD7 63 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 PYGO2Q9BRQ0 406 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 LY96Q9Y6Y9 160 aa7.39□□□□□ -1.23
SYNE2-215ENST00000554997 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
SYNE2-215ENST00000554997 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
SYNE2-215ENST00000554997 NHLRC2Q8NBF2 726 aa7.38□□□□□ -1.23
SYNE2-215ENST00000554997 X6R8D5 127 aa7.38□□□□□ -1.23
SYNE2-215ENST00000554997 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 TMEM218A2RU14 115 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 SFTA3P0C7M3 94 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 MIFP14174 115 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 ANXA2RQ3ZCQ2 193 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 KCNS1Q96KK3 526 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 RETNQ9HD89 108 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 NAT8Q9UHE5 227 aa7.37□□□□□ -1.23
SYNE2-215ENST00000554997 ZNF705GA8MUZ8 300 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-215ENST00000554997 SH2D1AO60880 128 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 PRM2P04554 102 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 MGST1P10620 155 aaKnown RBP7.36□□□□□ -1.23
SYNE2-215ENST00000554997 HTN1P15515 57 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 AZU1P20160 251 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 RRN3P1Q2M238 152 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 ZNF493Q6ZR52 646 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 LINC01551Q86U37 167 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 DAZAP1Q96EP5 407 aaKnown RBP7.36□□□□□ -1.23
SYNE2-215ENST00000554997 C11orf21Q9P2W6 132 aa7.36□□□□□ -1.23
SYNE2-215ENST00000554997 IGKV3D-20A0A0C4DH25 116 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 C19orf71A6NCJ1 209 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 CBY3A6NI87 242 aa7.35□□□□□ -1.23
SYNE2-215ENST00000554997 K7EN84 100 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms