RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 OR2G3Q8NGZ4 309 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 LINC01587Q99440 93 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 SLC50A1Q9BRV3 221 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 FUT9Q9Y231 359 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 HLA-DRB4X5D2U9 266 aa3.37□□□□□ -1.87
ATXN3-231ENST00000554994 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
ATXN3-231ENST00000554994 IGHV4-28A0A0C4DH34 117 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 PGPA6NDG6 321 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 ZNF705GA8MUZ8 300 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 PRAC2D3DTV9 90 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 SLC17A3O00476 420 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 SOCS3O14543 225 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 PRM2P04554 102 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 HTN3P15516 51 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 RNASE4P34096 147 aaKnown RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 CSN1S1P47710 185 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 TIRAPP58753 221 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 TAS2R45P59539 299 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 ZNF266Q14584 549 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 GUK1Q16774 197 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 TMEM41BQ5BJD5 291 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 AKR1C8PQ5T2L2 129 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 RPL7L1Q6DKI1 246 aaKnown RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 OR8A1Q8NGG7 326 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 MRPL32Q9BYC8 188 aaKnown RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 PARD6GQ9BYG4 376 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 SH3BGRL3Q9H299 93 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 ZNF331Q9NQX6 463 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-231ENST00000554994 TP53TG1Q9Y2A0 90 aa3.36□□□□□ -1.87
ATXN3-231ENST00000554994 TRBV19A0A075B6N1 114 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 A0A087X0K7 114 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TRAV12-3A0A0B4J271 114 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 A0A1B0GV50 99 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 KANTRA0A1W2PQU2 76 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 M0R3E3 92 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TAAR5O14804 337 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 MRPS12O15235 138 aaKnown RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 INSP01308 110 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 MBP02144 154 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 SLC25A5P05141 298 aaKnown RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 GPX1P07203 203 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 GIG44P09565 113 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 IGLC2P0DOY2 106 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 MIFP14174 115 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TSPOP30536 169 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 LEPP41159 167 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 RRN3P1Q2M238 152 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 LINC00336Q6ZUF6 198 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 BAP18Q8IXM2 172 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 GNPNAT1Q96EK6 184 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 SAT2Q96F10 170 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 C18orf15Q96N68 181 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 ZNF471Q9BX82 626 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TMEM14CQ9P0S9 112 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 TNFSF18Q9UNG2 199 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 PRELID1Q9Y255 219 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 FLG2Q5D862 2391 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-231ENST00000554994 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
ATXN3-231ENST00000554994 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 PKD1P98161 4303 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 IGKV2-40A0A087WW87 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-231ENST00000554994 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 IGLL5B9A064 214 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 NDUFB4O95168 129 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 IGKV2D-40P01614 121 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-231ENST00000554994 AMBPP02760 352 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 INAFM2P0DMQ5 153 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 CT45A10P0DMU9 189 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 DEFB130BP0DP73 79 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 DEFB130AP0DP74 79 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 CXCL2P19875 107 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 CDKN1BP46527 198 aa3.34□□□□□ -1.87
ATXN3-231ENST00000554994 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-231ENST00000554994 UBE2G2P60604 165 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms