RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TCL1BO95988 128 aa12.22□□□□□ -0.45
SYNE3-203ENST00000554873 TNFRSF1AP19438 455 aa12.22□□□□□ -0.45
SYNE3-203ENST00000554873 PRR30Q53SZ7 412 aaPredicted RBP12.22□□□□□ -0.45
SYNE3-203ENST00000554873 CEACAM4O75871 244 aa12.21□□□□□ -0.46
SYNE3-203ENST00000554873 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.46
SYNE3-203ENST00000554873 LAMA5O15230 3695 aa12.21□□□□□ -0.46
SYNE3-203ENST00000554873 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 TRAV8-2A0A0B4J237 113 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 CRLF1O75462 422 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 LYPD2Q6UXB3 125 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 DEFB124Q8NES8 71 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 MYOZ3Q8TDC0 251 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 TMEM126AQ9H061 195 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 PPDPFQ9H3Y8 114 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 SCGB2A1O75556 95 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 TNFRSF6BO95407 300 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 RNF185Q96GF1 192 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
SYNE3-203ENST00000554873 NDUFA3O95167 84 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 LGALS1P09382 135 aaKnown RBP12.19□□□□□ -0.46
SYNE3-203ENST00000554873 APELAP0DMC3 54 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 VMA21Q3ZAQ7 101 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 LINC00311Q8N616 119 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 NUP37Q8NFH4 326 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 IGHV3-72A0A0B4J1Y9 119 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 ADIPOQQ15848 244 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 M0QXV9 152 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
SYNE3-203ENST00000554873 OR11H6Q8NGC7 330 aa12.19□□□□□ -0.46
SYNE3-203ENST00000554873 SH2D1AO60880 128 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 Q8N8P6 123 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 CCL17Q92583 94 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 PVRIGQ6DKI7 326 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 MDFICQ9P1T7 246 aa12.18□□□□□ -0.46
SYNE3-203ENST00000554873 MGAQ8IWI9 3026 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 NDUFB3O43676 98 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 TMEM78Q5T7P6 136 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 RASL10AQ92737 203 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 GAS8-AS1O95177 125 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 LYZP61626 148 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 C8orf31Q8N9H6 132 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 PCNX1Q96RV3 2341 aa12.17□□□□□ -0.46
SYNE3-203ENST00000554873 DLX6P56179 175 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 SIGLEC15Q6ZMC9 328 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 LYPD1Q8N2G4 141 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 CTSZQ9UBR2 303 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 CD7P09564 240 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 CNTFRP26992 372 aa12.16□□□□□ -0.46
SYNE3-203ENST00000554873 LOXP28300 417 aaPredicted RBP12.15□□□□□ -0.46
SYNE3-203ENST00000554873 ATP5J2P56134 94 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 SPXQ9BT56 116 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 F8VRH5 84 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 H7C1H1 209 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 SLC25A20O43772 301 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYNE3-203ENST00000554873 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 NGBQ9NPG2 151 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
SYNE3-203ENST00000554873 IGLV2-18A0A075B6J9 118 aa12.15□□□□□ -0.47
SYNE3-203ENST00000554873 K7EM74 188 aa12.15□□□□□ -0.47
SYNE3-203ENST00000554873 RPL27AP46776 148 aaKnown RBP12.15□□□□□ -0.47
SYNE3-203ENST00000554873 Q6ZQT7 251 aa12.15□□□□□ -0.47
SYNE3-203ENST00000554873 NRGNQ92686 78 aa12.15□□□□□ -0.47
SYNE3-203ENST00000554873 C17orf77Q96MU5 243 aa12.15□□□□□ -0.47
SYNE3-203ENST00000554873 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 C5orf47Q569G3 176 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 RAXQ9Y2V3 346 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 MALRD1Q5VYJ5 2156 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 OTOGLQ3ZCN5 2332 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 TRAV12-1A0A0B4J245 112 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
SYNE3-203ENST00000554873 DLX1P56177 255 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 BSPH1Q075Z2 132 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 SCNM1Q9BWG6 230 aa12.14□□□□□ -0.47
SYNE3-203ENST00000554873 LAGE3Q14657 143 aa12.13□□□□□ -0.47
SYNE3-203ENST00000554873 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
SYNE3-203ENST00000554873 CRYGBP07316 175 aa12.13□□□□□ -0.47
SYNE3-203ENST00000554873 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
SYNE3-203ENST00000554873 SCGB1D4Q6XE38 83 aa12.13□□□□□ -0.47
SYNE3-203ENST00000554873 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
SYNE3-203ENST00000554873 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
SYNE3-203ENST00000554873 TGFAP01135 160 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 EGR2P11161 476 aaPredicted RBP12.12□□□□□ -0.47
SYNE3-203ENST00000554873 PLGLAQ15195 96 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 FAM57AQ8TBR7 257 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 CUL9Q8IWT3 2517 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 GATA1P15976 413 aaPredicted RBP12.12□□□□□ -0.47
SYNE3-203ENST00000554873 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
SYNE3-203ENST00000554873 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms