RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 STOML2Q9UJZ1 356 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 NUBP2Q9Y5Y2 271 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 FGD6Q6ZV73 1430 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 TRDV1A0A1B0GX56 115 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 TPST1O60507 370 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 EDF1O60869 148 aaKnown RBP-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 E2F6O75461 281 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 BCL2P10415 239 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 GTF2A1P52655 376 aaPredicted RBP-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 DNAJB13P59910 316 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 LYPD5Q6UWN5 251 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 LINC00305Q7Z4B0 112 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 ISOC1Q96CN7 298 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 CTTNBP2Q8WZ74 1663 aa-0.22□□□□□ -2.44
PCNX1-208ENST00000554707 KDM6BO15054 1643 aa-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 ANKRD17O75179 2603 aaKnown RBP-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 TMEM189A5PLL7 270 aa-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 SAA1P0DJI8 122 aaPredicted RBP-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 S100A11P31949 105 aa-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 IGF2RP11717 2491 aa-0.23□□□□□ -2.45
PCNX1-208ENST00000554707 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 LOC107986453A0A1B0GWG9 222 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 H7BYZ3 331 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 IGF2P01344 180 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 MRPS15P82914 257 aaKnown RBP-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 DCUN1D2Q6PH85 259 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 FAM213BQ8TBF2 198 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 HOPXQ9BPY8 73 aaPredicted RBP-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 SMIM7Q9BQ49 75 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 TMEM14BQ9NUH8 114 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 GID8Q9NWU2 228 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 MPC1Q9Y5U8 109 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 TECPR2O15040 1411 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 KIAA1549LQ6ZVL6 1849 aa-0.24□□□□□ -2.45
PCNX1-208ENST00000554707 A0A0G2JMM0 328 aa-0.25□□□□□ -2.45
PCNX1-208ENST00000554707 SLC25A4P12235 298 aa-0.25□□□□□ -2.45
PCNX1-208ENST00000554707 DEFB132Q7Z7B7 95 aa-0.25□□□□□ -2.45
PCNX1-208ENST00000554707 TRAPPC8Q9Y2L5 1435 aa-0.25□□□□□ -2.45
PCNX1-208ENST00000554707 TTC28Q96AY4 2481 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 TRAV13-1A0A0B4J241 112 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 TRBV27A0A0K0K1C4 114 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 MAP1LC3B2A6NCE7 125 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 H3BMG7 143 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 MPC1LP0DKB6 136 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 SERPINB1P30740 379 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 BLCAPP62952 87 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 KLKP1Q107X0 134 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 RHOHQ15669 191 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 C3orf33Q6P1S2 294 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 IDO2Q6ZQW0 420 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 DMAC1Q96GE9 116 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 ATG5Q9H1Y0 275 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 LAMTOR2Q9Y2Q5 125 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 U3KQA8 63 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 ABCA12Q86UK0 2595 aa-0.26□□□□□ -2.45
PCNX1-208ENST00000554707 DLC1Q96QB1 1528 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 M0QZK8 103 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 CCKP06307 115 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 CRYBA4P53673 196 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 UNQ5815/PRO19632Q6UWF5 114 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 HRCT1Q6UXD1 115 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 OR51A4Q8NGJ6 313 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 C19orf12Q9NSK7 152 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 RBBP6Q7Z6E9 1792 aaKnown RBP-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 CACNA1HO95180 2353 aa-0.27□□□□□ -2.45
PCNX1-208ENST00000554707 IFITM5A6NNB3 132 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 TFF1P04155 84 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 CRYGSP22914 178 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 CKS2P33552 79 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 ETV6P41212 452 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 CCSMST1Q4G0I0 132 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 STX12Q86Y82 276 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 MORN4Q8NDC4 146 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 DSCR8Q96T75 97 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 LXNQ9BS40 222 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 PRR15LQ9BU68 103 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 CCDC32Q9BV29 185 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 TRAPPC2LQ9UL33 140 aa-0.28□□□□□ -2.45
PCNX1-208ENST00000554707 USP54Q70EL1 1684 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 A0A096LNT2 108 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 IGHV1-24A0A0C4DH33 117 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 C9JAW5 83 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 PPP5D1E7EU14 171 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 G0S2P27469 103 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 COX6A2Q02221 97 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 TRIQKQ629K1 86 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 OR5A2Q8NGI9 324 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 ATG2AQ2TAZ0 1938 aa-0.29□□□□□ -2.46
PCNX1-208ENST00000554707 CPDO75976 1380 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 MYH2Q9UKX2 1941 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 TRAV17A0A0B4J275 112 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 F2Z2F3 143 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 IFITM1P13164 125 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 CDC26Q8NHZ8 85 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 BRK1Q8WUW1 75 aa-0.3□□□□□ -2.46
PCNX1-208ENST00000554707 CELSR1Q9NYQ6 3014 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 TMEM238C9JI98 176 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 PFDN1O60925 122 aa-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 POLR2JP52435 117 aaKnown RBP-0.31□□□□□ -2.46
PCNX1-208ENST00000554707 LSM3P62310 102 aaKnown RBP-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms