RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SPAARA0A1B0GVQ0 90 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 KRTAP29-1A8MX34 341 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-207ENST00000554439 CIDEAO60543 219 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 SH2D1AO60880 128 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 IGKV1-17P01599 117 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 PPIAL4FP0DN26 164 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 FABP2P12104 132 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 RPL27AP46776 148 aaKnown RBP1.99□□□□□ -2.09
PRPF39-207ENST00000554439 INSL3P51460 131 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 TWIST1Q15672 202 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 LGALS9BQ3B8N2 356 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 KLF17Q5JT82 389 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-207ENST00000554439 Q5PR19 223 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 FAM104BQ5XKR9 115 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 LGALS9CQ6DKI2 356 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 AMTNQ6UX39 209 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 SIGLEC15Q6ZMC9 328 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 GTSCR1Q86UQ5 136 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 ORMDL3Q8N138 153 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 Q8TAT8 98 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 SPXQ9BT56 116 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 NCOR1P1Q9H4R4 102 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 NHP2Q9NX24 153 aaKnown RBP1.99□□□□□ -2.09
PRPF39-207ENST00000554439 CTSZQ9UBR2 303 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 TSSC4Q9Y5U2 329 aaPredicted RBP1.99□□□□□ -2.09
PRPF39-207ENST00000554439 BDP1A6H8Y1 2624 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 COL12A1Q99715 3063 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 ABCA4P78363 2273 aa1.99□□□□□ -2.09
PRPF39-207ENST00000554439 CUL9Q8IWT3 2517 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 H3BMG7 143 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV3-23P01764 117 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 HBDP02042 147 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SMIM13P0DJ93 91 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 VPREB1P12018 145 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CD59P13987 128 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 HLA-DMBP28068 263 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CKS2P33552 79 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF80P51504 273 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 VMA21Q3ZAQ7 101 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TEX36Q5VZQ5 186 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF562Q6V9R5 426 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 MAPKAPK5-AS1Q8N8E1 139 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 OR4X2Q8NGF9 303 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 OR9G4Q8NGQ1 327 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PHLDA1Q8WV24 401 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ARPC1AQ92747 370 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 RASL11BQ9BPW5 248 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 MAP6D1Q9H9H5 199 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 NGBQ9NPG2 151 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 HHLA3Q9XRX5 114 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SIGLEC9Q9Y336 463 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CHTOPQ9Y3Y2 248 aaKnown RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 U3KQK5 164 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SPTBN2O15020 2390 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CSMD2Q7Z408 3487 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TRBV25-1A0A075B6N4 114 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV3-35A0A0C4DH35 117 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM189A5PLL7 270 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 I3L2K1 104 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 M0R296 226 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CDX4O14627 284 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 IL4P05112 153 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PRSS1P07477 247 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 LOXP28300 417 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 LEPP41159 167 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ATP5G2Q06055 141 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PIK3CD-AS1Q5SR53 167 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PVRIGQ6DKI7 326 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF493Q6ZR52 646 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 GATD1Q8NB37 220 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 OR5A1Q8NGJ0 315 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 DPF1Q92782 380 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 VGLL1Q99990 258 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 AAMDCQ9H7C9 122 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 FAM215AQ9Y5M1 114 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ACACAQ13085 2346 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ANKRD11Q6UB99 2663 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TRAV26-2A0A0B4J265 109 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TRAV40A0A0B4J280 105 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 LYNX1G3V0Z9 82 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 H3BRN7 92 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM178BH3BS89 294 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 K7EIM0 57 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 MRPS12O15235 138 aaKnown RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SIVA1O15304 175 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CRYGBP07316 175 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 CT45A10P0DMU9 189 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV1-8P0DP01 117 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 LYNX1P0DP58 116 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 COX7A1P24310 79 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 DLX6P56179 175 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PLGLAQ15195 96 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ETDBQ3ZM63 59 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ZC2HC1BQ5TFG8 222 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SFTA2Q6UW10 78 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 Q6ZQT7 251 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 PPP1R27Q86WC6 154 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 ZNF491Q8N8L2 437 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms