RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CD300CQ08708 224 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 ANKRD39Q53RE8 183 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 IBA57Q5T440 356 aaKnown RBP7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 Q6ZR54 194 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 ARL6IP6Q8N6S5 226 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 OR2G3Q8NGZ4 309 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 TMED6Q8WW62 240 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 FAT2Q9NYQ8 4349 aa7.29□□□□□ -1.24
PTCD2P1-201ENST00000554393 A0A1W2PPV4 95 aa7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 GIPP09681 153 aaPredicted RBP7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 FAM74A1Q5RGS3 127 aa7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 ATG101Q9BSB4 218 aa7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 PSMG3Q9BT73 122 aaPredicted RBP7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
PTCD2P1-201ENST00000554393 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 GAGE7O76087 117 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 NUDT3O95989 172 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 GAGE12FP0CL80 117 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 GAGE12GP0CL81 117 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 GAGE12IP0CL82 117 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 CCL18P55774 89 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 TCL1AP56279 114 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 RAB2AP61019 212 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 PRR9Q5T870 116 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 Q6ZTI0 123 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 Q8TAT8 98 aa7.27□□□□□ -1.25
PTCD2P1-201ENST00000554393 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 M0R2N4 97 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 RTL8CO15255 209 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 SPINK4O60575 86 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 MBP02144 154 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 HOXA5P20719 270 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 SERF2P84101 59 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 OR5I1Q13606 314 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 SOHLH1Q5JUK2 328 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 Q6AWC8 147 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 OR10G4Q8NGN3 311 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 OR10G9Q8NGN4 311 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 OR10G7Q8NGN6 311 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 ZNRF2Q8NHG8 242 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 CMTM2Q8TAZ6 248 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 GNPNAT1Q96EK6 184 aaPredicted RBP7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 ARPC5LQ9BPX5 153 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
PTCD2P1-201ENST00000554393 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 PGPA6NDG6 321 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 STAG3L2P0CL84 134 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 STAG3L3P0CL85 134 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 CDC34P49427 236 aaPredicted RBP7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 ZNF415Q09FC8 603 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 RGS21Q2M5E4 152 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 HSD17B11Q8NBQ5 300 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 INO80EQ8NBZ0 244 aaPredicted RBP7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 SUN5Q8TC36 379 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 TMPRSS5Q9H3S3 457 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 KLF12Q9Y4X4 402 aa7.25□□□□□ -1.25
PTCD2P1-201ENST00000554393 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 SERTM2A0A1B0GWG4 89 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 PRSS29PA6NIE9 313 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 ARL14EPLP0DKL9 152 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 ATP6V0CP27449 155 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 TDRG1Q3Y452 100 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 TP53TG3Q9ULZ0 132 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 TNFSF18Q9UNG2 199 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
PTCD2P1-201ENST00000554393 NBDYA0A0U1RRE5 68 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 RNF222A6NCQ9 220 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 EIF3GO75821 320 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 Q5BKY6 102 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 Q6ZQT7 251 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 GOLT1AQ6ZVE7 132 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 C5orf17Q8NAS9 161 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 TMEM167BQ9NRX6 74 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
PTCD2P1-201ENST00000554393 TRGV11A0A075B6L2 103 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 FXYD6-FXYD2A0A087WZ82 144 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 BORCS7-ASMTA0A0B4J1R7 106 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 A0A0J9YY99 117 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 CXorf1O96002 111 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 GCHFRP30047 84 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 SLAQ13239 276 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 FAM159AQ6UWV7 190 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 OR2T35Q8NGX2 323 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
PTCD2P1-201ENST00000554393 SPXQ9BT56 116 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms