RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
CPSF2-203ENST00000554290 RANP62826 216 aaKnown RBP12.89□□□□□ -0.35
CPSF2-203ENST00000554290 Q8TAT8 98 aa12.89□□□□□ -0.35
CPSF2-203ENST00000554290 ATP5SQ99766 215 aa12.89□□□□□ -0.35
CPSF2-203ENST00000554290 INMT-MINDY4F8WBC2 141 aa12.88□□□□□ -0.35
CPSF2-203ENST00000554290 UPK1BO75841 260 aa12.88□□□□□ -0.35
CPSF2-203ENST00000554290 LINC00315P59091 139 aa12.88□□□□□ -0.35
CPSF2-203ENST00000554290 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
CPSF2-203ENST00000554290 Q6ZQT7 251 aa12.88□□□□□ -0.35
CPSF2-203ENST00000554290 NXPH4O95158 308 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 CRYBA4P53673 196 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
CPSF2-203ENST00000554290 ZNF266Q14584 549 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 PPP1R1CQ8WVI7 109 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 LENEPQ9Y5L5 61 aa12.87□□□□□ -0.35
CPSF2-203ENST00000554290 IFNA5P01569 189 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 PET100P0DJ07 73 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 TAS2R45P59539 299 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 FHL2Q14192 279 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 KHDC3LQ587J8 217 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
CPSF2-203ENST00000554290 RYR1P21817 5038 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 H2BFSP57053 126 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 Q8N1X5 172 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 SPXQ9BT56 116 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 HSPB11Q9Y547 144 aa12.85□□□□□ -0.35
CPSF2-203ENST00000554290 EREGO14944 169 aa12.84□□□□□ -0.35
CPSF2-203ENST00000554290 Q6AWC8 147 aa12.84□□□□□ -0.35
CPSF2-203ENST00000554290 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
CPSF2-203ENST00000554290 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
CPSF2-203ENST00000554290 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 SSNA1O43805 119 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 MPC2O95563 127 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 TMEM183BQ1AE95 376 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 Q6ZRN7 208 aaPredicted RBP12.83□□□□□ -0.36
CPSF2-203ENST00000554290 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 TMEM183AQ8IXX5 376 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 HYLS1Q96M11 299 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
CPSF2-203ENST00000554290 RPL12P30050 165 aaKnown RBP12.82□□□□□ -0.36
CPSF2-203ENST00000554290 IFITM3Q01628 133 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 PCNPQ8WW12 178 aaKnown RBP12.82□□□□□ -0.36
CPSF2-203ENST00000554290 RASL10AQ92737 203 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
CPSF2-203ENST00000554290 PGPA6NDG6 321 aa12.81□□□□□ -0.36
CPSF2-203ENST00000554290 ORM1P02763 201 aa12.81□□□□□ -0.36
CPSF2-203ENST00000554290 SRIP30626 198 aa12.81□□□□□ -0.36
CPSF2-203ENST00000554290 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
CPSF2-203ENST00000554290 SCRT2Q9NQ03 307 aa12.81□□□□□ -0.36
CPSF2-203ENST00000554290 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 K7EP13 123 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
CPSF2-203ENST00000554290 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 PTTG2Q9NZH5 202 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 MBD2Q9UBB5 411 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
CPSF2-203ENST00000554290 ABCA13Q86UQ4 5058 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 K7EQD1 137 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 DEFA1P59665 94 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 DEFA3P59666 94 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 TDRG1Q3Y452 100 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 ARL6IP6Q8N6S5 226 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 NAGKQ9UJ70 344 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
CPSF2-203ENST00000554290 GYPEP15421 78 aa12.78□□□□□ -0.36
CPSF2-203ENST00000554290 PQLC2Q6ZP29 291 aa12.78□□□□□ -0.36
CPSF2-203ENST00000554290 TXNDC17Q9BRA2 123 aa12.78□□□□□ -0.36
CPSF2-203ENST00000554290 TNFRSF18Q9Y5U5 241 aa12.78□□□□□ -0.36
CPSF2-203ENST00000554290 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 C9JCJ5 164 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 M0R2P5 195 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 EVI2AP22794 236 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 GOLT1AQ6ZVE7 132 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 OR4C5Q8NGB2 326 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 HSPG2P98160 4391 aa12.77□□□□□ -0.37
CPSF2-203ENST00000554290 GNRH2O43555 120 aa12.76□□□□□ -0.37
CPSF2-203ENST00000554290 TREM1Q9NP99 234 aa12.76□□□□□ -0.37
CPSF2-203ENST00000554290 EIF3GO75821 320 aaKnown RBP eCLIP12.75□□□□□ -0.37
CPSF2-203ENST00000554290 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
CPSF2-203ENST00000554290 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
CPSF2-203ENST00000554290 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms