RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 FAM24AA6NFZ4 105 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 C9JCJ5 164 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 SFTA3P0C7M3 94 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 PVALBP20472 110 aaPredicted RBP11.92□□□□□ -0.5
SYNE2-211ENST00000553801 S100A11P31949 105 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 ZNF138P52744 262 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 SH2D6Q7Z4S9 175 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 ZNF479Q96JC4 524 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 SPXQ9BT56 116 aa11.92□□□□□ -0.5
SYNE2-211ENST00000553801 UBE2L5PA0A1B0GUS4 154 aa11.91□□□□□ -0.5
SYNE2-211ENST00000553801 LRCOL1A6NCL2 159 aa11.91□□□□□ -0.5
SYNE2-211ENST00000553801 Q6ZQT7 251 aa11.91□□□□□ -0.5
SYNE2-211ENST00000553801 RASL10AQ92737 203 aa11.91□□□□□ -0.5
SYNE2-211ENST00000553801 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
SYNE2-211ENST00000553801 FAM25EA8MYX2 175 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 FGF7P21781 194 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 SULT1A1P50225 295 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 HBG1P69891 147 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 HBG2P69892 147 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 BAK1Q16611 211 aa11.9□□□□□ -0.5
SYNE2-211ENST00000553801 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 CCSO14618 274 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 C1QBP02746 253 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
SYNE2-211ENST00000553801 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 ZNF266Q14584 549 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 MUC21Q5SSG8 566 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 STX12Q86Y82 276 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
SYNE2-211ENST00000553801 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 C5orf51A6NDU8 294 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 CSN1S1P47710 185 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 TIRAPP58753 221 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 Q8N814 137 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 SLC25A2Q9BXI2 301 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 SLC25A31Q9H0C2 315 aa11.88□□□□□ -0.51
SYNE2-211ENST00000553801 LYRM2Q9NU23 88 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-211ENST00000553801 CCDC160A6NGH7 325 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 BTCP35070 178 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 FAM159AQ6UWV7 190 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 OR4C5Q8NGB2 326 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 Q8TAT8 98 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 OR51M1Q9H341 326 aa11.87□□□□□ -0.51
SYNE2-211ENST00000553801 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 RBAKDNA6NC62 111 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 KRTAP29-1A8MX34 341 aaPredicted RBP11.86□□□□□ -0.51
SYNE2-211ENST00000553801 PPT1P50897 306 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 TMEM252Q8N6L7 170 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 NHLRC2Q8NBF2 726 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 FAM167A-AS1Q96KT0 104 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 FAM30AQ9NZY2 134 aa11.86□□□□□ -0.51
SYNE2-211ENST00000553801 IGSF23A1L1A6 192 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 S100A10P60903 97 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 Q6AWC8 147 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
SYNE2-211ENST00000553801 DNAH8Q96JB1 4490 aa11.84□□□□□ -0.51
SYNE2-211ENST00000553801 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
SYNE2-211ENST00000553801 DEFB104AQ8WTQ1 72 aa11.84□□□□□ -0.51
SYNE2-211ENST00000553801 Q9HAA7 133 aa11.84□□□□□ -0.51
SYNE2-211ENST00000553801 LOC100131303A0A0U1RQF7 123 aa11.83□□□□□ -0.52
SYNE2-211ENST00000553801 M0R2P5 195 aa11.83□□□□□ -0.52
SYNE2-211ENST00000553801 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
SYNE2-211ENST00000553801 OR10J4P0C629 311 aa11.83□□□□□ -0.52
SYNE2-211ENST00000553801 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
SYNE2-211ENST00000553801 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
SYNE2-211ENST00000553801 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
SYNE2-211ENST00000553801 SERTAD4-AS1Q5TG53 156 aa11.82□□□□□ -0.52
SYNE2-211ENST00000553801 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
SYNE2-211ENST00000553801 PHYHIPLQ96FC7 376 aa11.82□□□□□ -0.52
SYNE2-211ENST00000553801 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-211ENST00000553801 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
SYNE2-211ENST00000553801 RAB32Q13637 225 aa11.81□□□□□ -0.52
SYNE2-211ENST00000553801 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
SYNE2-211ENST00000553801 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
SYNE2-211ENST00000553801 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
SYNE2-211ENST00000553801 NAGKQ9UJ70 344 aa11.81□□□□□ -0.52
SYNE2-211ENST00000553801 IL7P13232 177 aa11.8□□□□□ -0.52
SYNE2-211ENST00000553801 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
SYNE2-211ENST00000553801 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 OR7C2O60412 319 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 IGHV3-33P01772 117 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 TCRBP04435 133 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 IGHV3-30-3P0DP02 117 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 IL15RAQ13261 267 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 LAGE3Q14657 143 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 Q6ZSA8 131 aa11.79□□□□□ -0.52
SYNE2-211ENST00000553801 THAP6Q8TBB0 222 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms