RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 NIPSNAP3BQ9BS92 247 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 AGPAT4-IT1Q9H0P7 198 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 EPDR1Q9UM22 224 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 K7EQM0 130 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 TSPOP30536 169 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 LEPP41159 167 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 ATP5G3P48201 142 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 ATG101Q9BSB4 218 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
TDP1-205ENST00000553527 AZU1P20160 251 aa16.84■□□□□ 0.29
TDP1-205ENST00000553527 ZNF138P52744 262 aa16.84■□□□□ 0.29
TDP1-205ENST00000553527 CYB561D1Q8N8Q1 229 aa16.84■□□□□ 0.29
TDP1-205ENST00000553527 Q8TAT8 98 aa16.84■□□□□ 0.29
TDP1-205ENST00000553527 IGHV4-4A0A075B6R2 117 aa16.83■□□□□ 0.28
TDP1-205ENST00000553527 PEX7O00628 323 aa16.83■□□□□ 0.28
TDP1-205ENST00000553527 HTN3P15516 51 aa16.83■□□□□ 0.28
TDP1-205ENST00000553527 TCEAL7Q9BRU2 100 aa16.83■□□□□ 0.28
TDP1-205ENST00000553527 TCTAP57738 103 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 LGALS9CQ6DKI2 356 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 CCDC28AQ8IWP9 274 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 TMEM256Q8N2U0 113 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 HIST1H2BAQ96A08 127 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 ZNF492Q9P255 531 aa16.82■□□□□ 0.28
TDP1-205ENST00000553527 TRAV8-1A0A0A6YYK1 113 aa16.81■□□□□ 0.28
TDP1-205ENST00000553527 F6UZH7 168 aa16.81■□□□□ 0.28
TDP1-205ENST00000553527 TEX48A0A1B0GUV7 120 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 BCL2P10415 239 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 TAS2R60P59551 318 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 DAD1P61803 113 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 GFI1BQ5VTD9 330 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 TMEM75Q8N9X5 138 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 LYPD6BQ8NI32 183 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 FAM19A4Q96LR4 140 aa16.8■□□□□ 0.28
TDP1-205ENST00000553527 TRAV12-3A0A0B4J271 114 aa16.79■□□□□ 0.28
TDP1-205ENST00000553527 SGK494Q96LW2 274 aa16.79■□□□□ 0.28
TDP1-205ENST00000553527 TRBV7-9A0A0J9YWB2 115 aa16.78■□□□□ 0.28
TDP1-205ENST00000553527 FBLL1A6NHQ2 334 aaKnown RBP16.78■□□□□ 0.28
TDP1-205ENST00000553527 CRISP2P16562 243 aa16.78■□□□□ 0.28
TDP1-205ENST00000553527 TAGLN2P37802 199 aaKnown RBP16.78■□□□□ 0.28
TDP1-205ENST00000553527 PCNPQ8WW12 178 aaKnown RBP16.78■□□□□ 0.28
TDP1-205ENST00000553527 TXNDC17Q9BRA2 123 aa16.78■□□□□ 0.28
TDP1-205ENST00000553527 NDFIP1Q9BT67 221 aa16.78■□□□□ 0.28
TDP1-205ENST00000553527 LENEPQ9Y5L5 61 aa16.78■□□□□ 0.28
TDP1-205ENST00000553527 H7BYZ3 331 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 NMBP08949 121 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 DEFB130BP0DP73 79 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 DEFB130AP0DP74 79 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 AKR1C3P42330 323 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 FLI1Q01543 452 aaPredicted RBP16.77■□□□□ 0.28
TDP1-205ENST00000553527 MEF2BQ02080 365 aaPredicted RBP16.77■□□□□ 0.28
TDP1-205ENST00000553527 VAX2Q9UIW0 290 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 PSG8Q9UQ74 426 aa16.77■□□□□ 0.28
TDP1-205ENST00000553527 SCO2A0A1W2PP80 73 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 KLLNB2CW77 178 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 GPX1P07203 203 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 PRNTQ86SH4 94 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 ZFAND2AQ8N6M9 145 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 LINC00479Q96M42 142 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 NDUFAF3Q9BU61 184 aa16.76■□□□□ 0.27
TDP1-205ENST00000553527 TRAV34A0A0B4J273 112 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 PLAC8L1A1L4L8 177 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 C7orf71A4D174 169 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 IGLV2-11P01706 119 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 UBE2G1P62253 170 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 BTN1A1Q13410 526 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 C16orf74Q96GX8 76 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 C20orf144Q9BQM9 153 aa16.75■□□□□ 0.27
TDP1-205ENST00000553527 LYRM9A8MSI8 78 aa16.74■□□□□ 0.27
TDP1-205ENST00000553527 RNASE4P34096 147 aaKnown RBP16.74■□□□□ 0.27
TDP1-205ENST00000553527 Q86TA4 180 aa16.74■□□□□ 0.27
TDP1-205ENST00000553527 FMC1Q96HJ9 113 aa16.74■□□□□ 0.27
TDP1-205ENST00000553527 TREM1Q9NP99 234 aa16.74■□□□□ 0.27
TDP1-205ENST00000553527 PRR9Q5T870 116 aa16.73■□□□□ 0.27
TDP1-205ENST00000553527 NOP10Q9NPE3 64 aaKnown RBP16.73■□□□□ 0.27
TDP1-205ENST00000553527 RBFOX3A6NFN3 312 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 PDE6DO43924 150 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 RAB14P61106 215 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 ZNF493Q6ZR52 646 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 TMEM263Q8WUH6 116 aaKnown RBP16.72■□□□□ 0.27
TDP1-205ENST00000553527 C11orf52Q96A22 123 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 TVP23CQ96ET8 276 aa16.72■□□□□ 0.27
TDP1-205ENST00000553527 TIMM8BQ9Y5J9 83 aaPredicted RBP16.72■□□□□ 0.27
TDP1-205ENST00000553527 KMT2AQ03164 3969 aa16.71■□□□□ 0.27
TDP1-205ENST00000553527 TMEM183BQ1AE95 376 aa16.71■□□□□ 0.27
TDP1-205ENST00000553527 TOR2AQ5JU69 321 aa16.71■□□□□ 0.27
TDP1-205ENST00000553527 SAPCD1Q5SSQ6 148 aa16.71■□□□□ 0.27
TDP1-205ENST00000553527 RNASE8Q8TDE3 154 aaKnown RBP16.71■□□□□ 0.27
TDP1-205ENST00000553527 KLF12Q9Y4X4 402 aa16.71■□□□□ 0.27
TDP1-205ENST00000553527 S100A9P06702 114 aaKnown RBP16.7■□□□□ 0.26
TDP1-205ENST00000553527 IFITM2Q01629 132 aa16.7■□□□□ 0.26
TDP1-205ENST00000553527 ZNF506Q5JVG8 444 aa16.7■□□□□ 0.26
TDP1-205ENST00000553527 FAM210AQ96ND0 272 aa16.7■□□□□ 0.26
TDP1-205ENST00000553527 TRBV6-1A0A0K0K1D8 114 aa16.69■□□□□ 0.26
TDP1-205ENST00000553527 C8orf49Q96NF6 230 aa16.69■□□□□ 0.26
TDP1-205ENST00000553527 PYGO2Q9BRQ0 406 aa16.69■□□□□ 0.26
TDP1-205ENST00000553527 EIF5A2Q9GZV4 153 aaKnown RBP16.69■□□□□ 0.26
TDP1-205ENST00000553527 F5H768 121 aa16.68■□□□□ 0.26
TDP1-205ENST00000553527 TMEM88Q6PEY1 159 aa16.68■□□□□ 0.26
TDP1-205ENST00000553527 MED9Q9NWA0 146 aa16.68■□□□□ 0.26
TDP1-205ENST00000553527 SNURFLB1AK76 121 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms