RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZFHX4Q86UP3 3567 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 SPTBN4Q9H254 2564 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 LAMA1P25391 3075 aa1.36□□□□□ -2.19
SYNE2-210ENST00000553455 PTPRZ1P23471 2315 aaPredicted RBP1.35□□□□□ -2.19
SYNE2-210ENST00000553455 WDFY3Q8IZQ1 3526 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 EP300Q09472 2414 aaPredicted RBP1.35□□□□□ -2.19
SYNE2-210ENST00000553455 PTPRDP23468 1912 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 DCHS1Q96JQ0 3298 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 M0R2N4 97 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 NDUFB3O43676 98 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 TIMM17BO60830 172 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 PAEPP09466 180 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 CLECL1Q8IZS7 167 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 CHCHD2Q9Y6H1 151 aaPredicted RBP1.35□□□□□ -2.19
SYNE2-210ENST00000553455 CACNA1AO00555 2505 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 CFAP54Q96N23 3096 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 FAM186AA6NE01 2351 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 GVINP1Q7Z2Y8 2422 aa1.35□□□□□ -2.19
SYNE2-210ENST00000553455 MYO18AQ92614 2054 aaKnown RBP1.35□□□□□ -2.19
SYNE2-210ENST00000553455 TNRC6AQ8NDV7 1962 aaKnown RBP1.34□□□□□ -2.19
SYNE2-210ENST00000553455 KNTC1P50748 2209 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 DMXL1Q9Y485 3027 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 TRBV6-7A0A0A0MS04 114 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 CST8O60676 142 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 CXCL8P10145 99 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 GNG5P63218 68 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 BCL2L15Q5TBC7 163 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 Q8N814 137 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 GINS2Q9Y248 185 aa1.34□□□□□ -2.19
SYNE2-210ENST00000553455 ASPMQ8IZT6 3477 aa1.34□□□□□ -2.2
SYNE2-210ENST00000553455 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
SYNE2-210ENST00000553455 BSNQ9UPA5 3926 aa1.34□□□□□ -2.2
SYNE2-210ENST00000553455 NUP210Q8TEM1 1887 aaPredicted RBP1.33□□□□□ -2.2
SYNE2-210ENST00000553455 ROS1P08922 2347 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 KNL1Q8NG31 2342 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 CEP250Q9BV73 2442 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 ZNF736B4DX44 427 aaPredicted RBP1.33□□□□□ -2.2
SYNE2-210ENST00000553455 TMEM256-PLSCR3K7ERE1 68 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 DHFRP00374 187 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 TFAMQ00059 246 aaKnown RBP1.33□□□□□ -2.2
SYNE2-210ENST00000553455 TEX261Q6UWH6 196 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 CANT1Q8WVQ1 401 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 TCEAL4Q96EI5 215 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 RASL12Q9NYN1 266 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 U3KQ87 197 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 MYH10P35580 1976 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 DOCK4Q8N1I0 1966 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 CNOT1A5YKK6 2376 aaKnown RBP1.33□□□□□ -2.2
SYNE2-210ENST00000553455 PI4KAP42356 2102 aa1.33□□□□□ -2.2
SYNE2-210ENST00000553455 DMXL2Q8TDJ6 3036 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 SMG1Q96Q15 3661 aaKnown RBP1.32□□□□□ -2.2
SYNE2-210ENST00000553455 TSC2P49815 1807 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 PATJQ8NI35 1801 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 CCDC160A6NGH7 325 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 A8MWV9 139 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 B4DSR2 109 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 INE1O15225 51 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 ATG12O94817 140 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 NDUFC2O95298 119 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 ROMO1P60602 79 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 UBE2BP63146 152 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 PPP1R2P3Q6NXS1 205 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 OR10K1Q8NGX5 313 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 AP3S1Q92572 193 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 SLC25A21Q9BQT8 299 aaPredicted RBP1.32□□□□□ -2.2
SYNE2-210ENST00000553455 SPAG17Q6Q759 2223 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 ZZEF1O43149 2961 aa1.32□□□□□ -2.2
SYNE2-210ENST00000553455 SPENQ96T58 3664 aaKnown RBP1.31□□□□□ -2.2
SYNE2-210ENST00000553455 DSPP15924 2871 aaKnown RBP1.31□□□□□ -2.2
SYNE2-210ENST00000553455 HELZP42694 1942 aaKnown RBP1.31□□□□□ -2.2
SYNE2-210ENST00000553455 CEP295Q9C0D2 2601 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 EML5Q05BV3 1969 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 CCL16O15467 120 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 MYL5Q02045 173 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 LINC00526Q96FQ7 95 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 TEX37Q96LM6 180 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 GPER1Q99527 375 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 MRPL57Q9BQC6 102 aaKnown RBP1.31□□□□□ -2.2
SYNE2-210ENST00000553455 LINC00467Q9BRT7 94 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 CDC42SE1Q9NRR8 79 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 PCTPQ9UKL6 214 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
SYNE2-210ENST00000553455 NBEAQ8NFP9 2946 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 ANKRD11Q6UB99 2663 aaPredicted RBP1.3□□□□□ -2.2
SYNE2-210ENST00000553455 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
SYNE2-210ENST00000553455 NBPF19A0A087WUL8 3843 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 G3V2T6 193 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 GGCTO75223 188 aaKnown RBP1.3□□□□□ -2.2
SYNE2-210ENST00000553455 BANF1O75531 89 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 DYNLT3P51808 116 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 ARPP19P56211 112 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 RPL19P84098 196 aaKnown RBP1.3□□□□□ -2.2
SYNE2-210ENST00000553455 TMEM35BQ8NCS4 154 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 C4orf3Q8WVX3 66 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 SS18L2Q9UHA2 77 aa1.3□□□□□ -2.2
SYNE2-210ENST00000553455 AKAP13Q12802 2813 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms