RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RPL29P47914 159 aaKnown RBP6.04□□□□□ -1.44
SYNE2-209ENST00000553308 PPT1P50897 306 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 BCAP31P51572 246 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 CAV2P51636 162 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 VAMP2P63027 116 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 BAXQ07812 192 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 C12orf45Q8N5I9 185 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-209ENST00000553308 SYT8Q8NBV8 401 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 RASL10AQ92737 203 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 AAMDCQ9H7C9 122 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 UQCC1Q9NVA1 299 aa6.04□□□□□ -1.44
SYNE2-209ENST00000553308 LSM5Q9Y4Y9 91 aaKnown RBP6.04□□□□□ -1.44
SYNE2-209ENST00000553308 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 FAM24AA6NFZ4 105 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 NOL3O60936 208 aaKnown RBP6.03□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-30P01768 117 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-33P01772 117 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-30-3P0DP02 117 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-30-5P0DP03 117 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 ZNF138P52744 262 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 TMEM183BQ1AE95 376 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 VWC2Q2TAL6 325 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 GCSAMLQ5JQS6 135 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 TMEM183AQ8IXX5 376 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 SLC25A2Q9BXI2 301 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 SLC25A31Q9H0C2 315 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 C11orf1Q9H5F2 150 aa6.03□□□□□ -1.44
SYNE2-209ENST00000553308 IGHV3-16A0A0C4DH30 117 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 FGF7P21781 194 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 BTCP35070 178 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 TIRAPP58753 221 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 ZNF266Q14584 549 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 OR4C5Q8NGB2 326 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 MITD1Q8WV92 249 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 FAM167A-AS1Q96KT0 104 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 SPXQ9BT56 116 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 C20orf85Q9H1P6 137 aa6.02□□□□□ -1.45
SYNE2-209ENST00000553308 GPN1Q9HCN4 374 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-209ENST00000553308 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-209ENST00000553308 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 TRBV7-9A0A0J9YWB2 115 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 IGSF23A1L1A6 192 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 NAP1L6A6NFF2 107 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 LECT2O14960 151 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-209ENST00000553308 S100A5P33763 92 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-209ENST00000553308 ZNF846Q147U1 533 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 BAK1Q16611 211 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 LINC01620Q4KN68 170 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 OR10J3Q5JRS4 329 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 Q6AWC8 147 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 MIR17HGQ75NE6 70 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 SH2D6Q7Z4S9 175 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 PHYHIPLQ96FC7 376 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 NAGKQ9UJ70 344 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
SYNE2-209ENST00000553308 TRAV8-6A0A0B4J262 113 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 FAM25EA8MYX2 175 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 OR10J4P0C629 311 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 NBEAP1P0C6P0 100 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 INPP1P49441 399 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 SULT1A1P50225 295 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 TRIQKQ629K1 86 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 FAM159AQ6UWV7 190 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 Q8N3U1 123 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 NPCDR1Q9BY65 106 aa6□□□□□ -1.45
SYNE2-209ENST00000553308 RBAKDNA6NC62 111 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 M0R2P5 195 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 GNRH2O43555 120 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 OXTP01178 125 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 S100A11P31949 105 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 S100A10P60903 97 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 LAGE3Q14657 143 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 TMEM252Q8N6L7 170 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 FXYD5Q96DB9 178 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 PAXXQ9BUH6 204 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 OR51M1Q9H341 326 aa5.99□□□□□ -1.45
SYNE2-209ENST00000553308 LYRM2Q9NU23 88 aaPredicted RBP5.99□□□□□ -1.45
SYNE2-209ENST00000553308 C5orf51A6NDU8 294 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 FBLL1A6NHQ2 334 aaKnown RBP5.98□□□□□ -1.45
SYNE2-209ENST00000553308 TYMSP04818 313 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 PFN1P07737 140 aaKnown RBP5.98□□□□□ -1.45
SYNE2-209ENST00000553308 PVALBP20472 110 aaPredicted RBP5.98□□□□□ -1.45
SYNE2-209ENST00000553308 CSN1S1P47710 185 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 RANP62826 216 aaKnown RBP5.98□□□□□ -1.45
SYNE2-209ENST00000553308 HBG1P69891 147 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 HBG2P69892 147 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 TDRG1Q3Y452 100 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 SPANXN2Q5MJ10 180 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 LELP1Q5T871 98 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 STX12Q86Y82 276 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 SLC25A29Q8N8R3 303 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 THAP6Q8TBB0 222 aa5.98□□□□□ -1.45
SYNE2-209ENST00000553308 SDHCQ99643 169 aaPredicted RBP5.98□□□□□ -1.45
SYNE2-209ENST00000553308 TM2D2Q9BX73 214 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms