RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 GALR1P47211 349 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 TEX261Q6UWH6 196 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 SIGLEC15Q6ZMC9 328 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 MIR17HGQ75NE6 70 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 BPIFA4PQ86YQ2 179 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 SEPSECSQ9HD40 501 aaKnown RBP6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 OR7C2O60412 319 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 SPATA31B1PQ5VZV4 182 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 PQLC2Q6ZP29 291 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 LRRC20Q8TCA0 184 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 GLMPQ8WWB7 406 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 RAB24Q969Q5 203 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 SLC25A2Q9BXI2 301 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 TMEM14CQ9P0S9 112 aa6.94□□□□□ -1.3
SLC48A1-209ENST00000552003 LPAP08519 4548 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 TRAV5A0A0B4J249 113 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 MAP1LC3B2A6NCE7 125 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 TEX46H3BTG2 121 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 CXorf1O96002 111 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 STAG3L2P0CL84 134 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 STAG3L3P0CL85 134 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 HLA-DRB4P13762 266 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 MEOX2P50222 304 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 NUTF2P61970 127 aaKnown RBP6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 UBE2L3P68036 154 aaKnown RBP6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 MORN5Q5VZ52 161 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 ZNF680Q8NEM1 530 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 PAXXQ9BUH6 204 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 MAP1LC3BQ9GZQ8 125 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 SLC35B3Q9H1N7 401 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 HLA-DRB4X5D2U9 266 aa6.93□□□□□ -1.3
SLC48A1-209ENST00000552003 A0A087X0K7 114 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 HBE1P02100 147 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 H2AFB1P0C5Y9 115 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 ARL14EPLP0DKL9 152 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 FHITP49789 147 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 BLOC1S1P78537 153 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 GUK1Q16774 197 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 SAT2Q96F10 170 aaPredicted RBP6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 OR51M1Q9H341 326 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 MRPS16Q9Y3D3 137 aaKnown RBP6.92□□□□□ -1.3
SLC48A1-209ENST00000552003 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 HMGB3O15347 200 aaKnown RBP6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 IGLC2P0DOY2 106 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 PYYP10082 97 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 HIST1H1EP10412 219 aaKnown RBP6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 GCHFRP30047 84 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 LCN15Q6UWW0 184 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 IQCF2Q8IXL9 164 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 MBD3L1Q8WWY6 194 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 TMEM167BQ9NRX6 74 aa6.91□□□□□ -1.3
SLC48A1-209ENST00000552003 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 ZNF253O75346 499 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 OR10J4P0C629 311 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 PSMB3P49720 205 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 PPT1P50897 306 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 FGF8P55075 233 aaPredicted RBP6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 RAB14P61106 215 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 PDE6HQ13956 83 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 RRN3P1Q2M238 152 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 FXYD5Q96DB9 178 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.3
SLC48A1-209ENST00000552003 TRBV19A0A075B6N1 114 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 ZNF705GA8MUZ8 300 aaPredicted RBP6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 ISLRO14498 428 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 EIF3GO75821 320 aaKnown RBP eCLIP6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 IFNA1P01562 189 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 NBEAP1P0C6P0 100 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 AZU1P20160 251 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 ID1P41134 155 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 PSG9Q00887 426 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 IFITM2Q01629 132 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 TOR2AQ5JU69 321 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 SUN5Q8TC36 379 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
SLC48A1-209ENST00000552003 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 A0A1B0GV50 99 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 LYRM9A8MSI8 78 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 H3BQ15 152 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 ATP5G1P05496 136 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 ATP5G3P48201 142 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 Q6ZSA8 131 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 AAMDCQ9H7C9 122 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms